RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-208ENST00000414711 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 LEPROTL1O95214 131 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 KRTAP1-4P0C5Y4 121 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 RPL13AP40429 203 aaKnown RBP9.43□□□□□ -0.9
CPNE1-208ENST00000414711 Q6ZUT4 128 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
CPNE1-208ENST00000414711 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
CPNE1-208ENST00000414711 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
CPNE1-208ENST00000414711 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
CPNE1-208ENST00000414711 VCX2Q9H322 139 aa9.42□□□□□ -0.9
CPNE1-208ENST00000414711 KRTAP9-7A8MTY7 169 aa9.41□□□□□ -0.9
CPNE1-208ENST00000414711 TSPAN13O95857 204 aa9.41□□□□□ -0.9
CPNE1-208ENST00000414711 S100A2P29034 98 aa9.41□□□□□ -0.9
CPNE1-208ENST00000414711 IFI27L1Q96BM0 104 aa9.41□□□□□ -0.9
CPNE1-208ENST00000414711 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CPNE1-208ENST00000414711 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
CPNE1-208ENST00000414711 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
CPNE1-208ENST00000414711 FABP4P15090 132 aa9.4□□□□□ -0.9
CPNE1-208ENST00000414711 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
CPNE1-208ENST00000414711 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
CPNE1-208ENST00000414711 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
CPNE1-208ENST00000414711 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
CPNE1-208ENST00000414711 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 C5orf52A6NGY3 159 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 CCL25O15444 150 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 PMVKQ15126 192 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 SS18Q15532 418 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 AMELXQ99217 191 aa9.39□□□□□ -0.91
CPNE1-208ENST00000414711 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
CPNE1-208ENST00000414711 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
CPNE1-208ENST00000414711 LINC00959A0A1B0GUT2 108 aa9.37□□□□□ -0.91
CPNE1-208ENST00000414711 LINC00173Q6ZV60 143 aa9.37□□□□□ -0.91
CPNE1-208ENST00000414711 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
CPNE1-208ENST00000414711 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
CPNE1-208ENST00000414711 TRAV13-1A0A0B4J241 112 aa9.36□□□□□ -0.91
CPNE1-208ENST00000414711 GAGE2BQ13066 116 aa9.36□□□□□ -0.91
CPNE1-208ENST00000414711 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
CPNE1-208ENST00000414711 SEC11AP67812 179 aa9.35□□□□□ -0.91
CPNE1-208ENST00000414711 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
CPNE1-208ENST00000414711 PHF5AQ7RTV0 110 aaKnown RBP9.35□□□□□ -0.91
CPNE1-208ENST00000414711 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-208ENST00000414711 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
CPNE1-208ENST00000414711 HIST1H2BLQ99880 126 aa9.35□□□□□ -0.91
CPNE1-208ENST00000414711 C9orf116Q5BN46 136 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-208ENST00000414711 H0Y8G0 127 aa9.33□□□□□ -0.92
CPNE1-208ENST00000414711 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
CPNE1-208ENST00000414711 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
CPNE1-208ENST00000414711 SYS1-DBNDD2H3BUS1 97 aa9.32□□□□□ -0.92
CPNE1-208ENST00000414711 XCL1P47992 114 aa9.32□□□□□ -0.92
CPNE1-208ENST00000414711 KRTDAPP60985 99 aa9.32□□□□□ -0.92
CPNE1-208ENST00000414711 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
CPNE1-208ENST00000414711 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
CPNE1-208ENST00000414711 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 HERVK_113P63121 156 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
CPNE1-208ENST00000414711 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
CPNE1-208ENST00000414711 F8VRH5 84 aa9.3□□□□□ -0.92
CPNE1-208ENST00000414711 FOXI1Q12951 378 aa9.3□□□□□ -0.92
CPNE1-208ENST00000414711 A0A087WZ39 114 aa9.29□□□□□ -0.92
CPNE1-208ENST00000414711 C20orf202A1L168 122 aa9.29□□□□□ -0.92
CPNE1-208ENST00000414711 IGLC3P0DOY3 106 aa9.29□□□□□ -0.92
CPNE1-208ENST00000414711 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
CPNE1-208ENST00000414711 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
CPNE1-208ENST00000414711 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.28□□□□□ -0.92
CPNE1-208ENST00000414711 COX7A2LO14548 114 aa9.28□□□□□ -0.92
CPNE1-208ENST00000414711 AKR1D1P51857 326 aa9.28□□□□□ -0.92
CPNE1-208ENST00000414711 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
CPNE1-208ENST00000414711 IGLV4-69A0A075B6H9 119 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 CRYGAP11844 174 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 PLNP26678 52 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
CPNE1-208ENST00000414711 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 H3BRM9 83 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 DPM2O94777 84 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 MALP21145 153 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
CPNE1-208ENST00000414711 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 APOMO95445 188 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 IGKCP01834 107 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 C5orf38Q86SI9 138 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
CPNE1-208ENST00000414711 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
CPNE1-208ENST00000414711 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
CPNE1-208ENST00000414711 ZNF22P17026 224 aaPredicted RBP9.23□□□□□ -0.93
CPNE1-208ENST00000414711 SCGB1D1O95968 90 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms