RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 G0S2P27469 103 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 MRPS36P82909 103 aaKnown RBP5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 TEX43Q6ZNM6 134 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
UPF3AP1-201ENST00000413731 COLCA2A8K830 154 aa5.27□□□□□ -1.57
UPF3AP1-201ENST00000413731 PANO1I0J062 215 aa5.27□□□□□ -1.57
UPF3AP1-201ENST00000413731 CNBPP62633 177 aaKnown RBP5.27□□□□□ -1.57
UPF3AP1-201ENST00000413731 PYGO1Q9Y3Y4 419 aa5.27□□□□□ -1.57
UPF3AP1-201ENST00000413731 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 TRGC2P03986 189 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 S100A1P23297 94 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 C5orf38Q86SI9 138 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 VCX2Q9H322 139 aa5.26□□□□□ -1.57
UPF3AP1-201ENST00000413731 APOMO95445 188 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 C9orf163Q8N9P6 203 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 FAM104AQ969W3 186 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 TOMM6Q96B49 74 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 LINC00526Q96FQ7 95 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 SCGB3A1Q96QR1 104 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 TIMM17AQ99595 171 aa5.25□□□□□ -1.57
UPF3AP1-201ENST00000413731 LINC01549A6NIU2 74 aa5.24□□□□□ -1.57
UPF3AP1-201ENST00000413731 IGIPA6NJ69 53 aa5.24□□□□□ -1.57
UPF3AP1-201ENST00000413731 ZC2HC1BQ5TFG8 222 aa5.24□□□□□ -1.57
UPF3AP1-201ENST00000413731 Q6ZRU5 148 aa5.24□□□□□ -1.57
UPF3AP1-201ENST00000413731 ORAOV1Q8WV07 137 aa5.24□□□□□ -1.57
UPF3AP1-201ENST00000413731 LINC01546A6NGU7 62 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 SLPIP03973 132 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 UBE2D1P51668 147 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 RAB5BP61020 215 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 LINC00242Q5T6M2 205 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 LINC00173Q6ZV60 143 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
UPF3AP1-201ENST00000413731 IGLV4-69A0A075B6H9 119 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 IGHV3OR16-9A0A0B4J2B5 98 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 IGKV2-24A0A0C4DH68 120 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 HBDP02042 147 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 COX6A2Q02221 97 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 PMCHL1Q16048 86 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 AMELXQ99217 191 aa5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 GEMIN7Q9H840 131 aaKnown RBP5.22□□□□□ -1.57
UPF3AP1-201ENST00000413731 A0A087WZ39 114 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 LINC00614P0C842 121 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 CHTF8P0CG12 524 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 HERVK_113P63121 156 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 SEC11AP67812 179 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 SDIM1Q6ZPB5 146 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 BAGE3Q86Y29 109 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 DPH3Q96FX2 82 aa5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 PACRGQ96M98 296 aaPredicted RBP5.21□□□□□ -1.58
UPF3AP1-201ENST00000413731 A0A096LNJ9 63 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 NDUFA1O15239 70 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 NDUFA6P56556 154 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 CIRBPQ14011 172 aaKnown RBP5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 LINC00469Q8N7U9 141 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 SPACA4Q8TDM5 124 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
UPF3AP1-201ENST00000413731 A0A096LNI7 61 aa5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 PMVKQ15126 192 aa5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
UPF3AP1-201ENST00000413731 A0A087WYN8 130 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 LOC107984640A0A0U1RRK4 108 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BKO60814 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HSBP1O75506 76 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 SERF1AO75920 110 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 ATP5LO75964 103 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BJP06899 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BOP23527 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BBP33778 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BDP58876 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BCP62807 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST2H2BEQ16778 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 LINC01561Q8N1V8 128 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BHQ93079 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BNQ99877 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 HIST1H2BMQ99879 126 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 CST9LQ9H4G1 147 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 CDKN2A-AS1Q9UH64 79 aa5.18□□□□□ -1.58
UPF3AP1-201ENST00000413731 TINCRA0A1B0GVN0 87 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 NUPR1O60356 82 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 CKS1BP61024 79 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 PDZD11Q5EBL8 140 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 LINC00518Q8N0U6 118 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 FAM19A2Q8N3H0 131 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 STPG4Q8N801 248 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 MRPL35Q9NZE8 188 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms