RNA–Protein interactions for RNA: ENST00000413465.6

TP53-203, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-203ENST00000413465 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
TP53-203ENST00000413465 GEMIN7Q9H840 131 aaKnown RBP6.94□□□□□ -1.3
TP53-203ENST00000413465 TRAPPC1Q9Y5R8 145 aa6.94□□□□□ -1.3
TP53-203ENST00000413465 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
TP53-203ENST00000413465 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
TP53-203ENST00000413465 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
TP53-203ENST00000413465 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
TP53-203ENST00000413465 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
TP53-203ENST00000413465 PRSS2P07478 247 aa6.92□□□□□ -1.3
TP53-203ENST00000413465 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
TP53-203ENST00000413465 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
TP53-203ENST00000413465 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
TP53-203ENST00000413465 OXTP01178 125 aa6.91□□□□□ -1.3
TP53-203ENST00000413465 TLX1NBP0CAT3 122 aa6.91□□□□□ -1.3
TP53-203ENST00000413465 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
TP53-203ENST00000413465 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
TP53-203ENST00000413465 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 RAB5BP61020 215 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 CKS1BP61024 79 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 Q8IZM0 81 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 C6orf48Q9UBA6 75 aa6.9□□□□□ -1.3
TP53-203ENST00000413465 A0A0J9YXV3 536 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 LINC00614P0C842 121 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
TP53-203ENST00000413465 PMVKQ15126 192 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
TP53-203ENST00000413465 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
TP53-203ENST00000413465 HBDP02042 147 aa6.88□□□□□ -1.31
TP53-203ENST00000413465 CXCL5P42830 114 aa6.88□□□□□ -1.31
TP53-203ENST00000413465 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
TP53-203ENST00000413465 CST9LQ9H4G1 147 aa6.88□□□□□ -1.31
TP53-203ENST00000413465 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
TP53-203ENST00000413465 NDUFC2-KCTD14E9PQ53 114 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 VPREB1P12018 145 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
TP53-203ENST00000413465 PDZD11Q5EBL8 140 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 Q6ZRP5 223 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 YPEL4Q96NS1 127 aa6.87□□□□□ -1.31
TP53-203ENST00000413465 F8VRH5 84 aa6.86□□□□□ -1.31
TP53-203ENST00000413465 H3BRM9 83 aa6.86□□□□□ -1.31
TP53-203ENST00000413465 ATP5LO75964 103 aa6.86□□□□□ -1.31
TP53-203ENST00000413465 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
TP53-203ENST00000413465 A0A096LNJ9 63 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 GAGE2EQ4V326 116 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
TP53-203ENST00000413465 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 GAGE2DQ9UEU5 116 aa6.85□□□□□ -1.31
TP53-203ENST00000413465 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
TP53-203ENST00000413465 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
TP53-203ENST00000413465 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
TP53-203ENST00000413465 HERC1Q15751 4861 aa6.83□□□□□ -1.32
TP53-203ENST00000413465 A4D1N5 150 aa6.83□□□□□ -1.32
TP53-203ENST00000413465 NDUFA6P56556 154 aa6.83□□□□□ -1.32
TP53-203ENST00000413465 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
TP53-203ENST00000413465 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
TP53-203ENST00000413465 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
TP53-203ENST00000413465 FAM168BA1KXE4 195 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 M0QXV9 152 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
TP53-203ENST00000413465 SLC7A5P1Q8MH63 180 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
TP53-203ENST00000413465 HSBP1O75506 76 aa6.8□□□□□ -1.32
TP53-203ENST00000413465 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
TP53-203ENST00000413465 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
TP53-203ENST00000413465 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
TP53-203ENST00000413465 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
TP53-203ENST00000413465 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
TP53-203ENST00000413465 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
TP53-203ENST00000413465 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 TRGC2P03986 189 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 UBE2BP63146 152 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 XP32Q5T750 250 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 IFI27L1Q96BM0 104 aa6.78□□□□□ -1.32
TP53-203ENST00000413465 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
TP53-203ENST00000413465 C11orf86A6NJI1 115 aa6.77□□□□□ -1.33
TP53-203ENST00000413465 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
TP53-203ENST00000413465 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
TP53-203ENST00000413465 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
TP53-203ENST00000413465 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
TP53-203ENST00000413465 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
TP53-203ENST00000413465 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
TP53-203ENST00000413465 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
TP53-203ENST00000413465 LINC01600Q96MT4 127 aa6.76□□□□□ -1.33
TP53-203ENST00000413465 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
TP53-203ENST00000413465 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
TP53-203ENST00000413465 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
TP53-203ENST00000413465 COX17Q14061 63 aa6.75□□□□□ -1.33
TP53-203ENST00000413465 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
TP53-203ENST00000413465 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms