RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 C14orf177Q52M58 125 aa16.89■□□□□ 0.3
RHBDD3-203ENST00000413137 NMUP48645 174 aa16.89■□□□□ 0.29
RHBDD3-203ENST00000413137 VAMP8Q9BV40 100 aa16.89■□□□□ 0.29
RHBDD3-203ENST00000413137 CKS1BP61024 79 aa16.87■□□□□ 0.29
RHBDD3-203ENST00000413137 Q6ZRU5 148 aa16.87■□□□□ 0.29
RHBDD3-203ENST00000413137 PCP2Q8IVA1 136 aa16.87■□□□□ 0.29
RHBDD3-203ENST00000413137 C2orf48Q96LS8 159 aa16.87■□□□□ 0.29
RHBDD3-203ENST00000413137 CAMK2N2Q96S95 79 aa16.87■□□□□ 0.29
RHBDD3-203ENST00000413137 SPATA45Q537H7 98 aa16.86■□□□□ 0.29
RHBDD3-203ENST00000413137 LINC00336Q6ZUF6 198 aa16.86■□□□□ 0.29
RHBDD3-203ENST00000413137 ZNF625Q96I27 306 aaPredicted RBP16.86■□□□□ 0.29
RHBDD3-203ENST00000413137 SMIM6P0DI80 62 aa16.85■□□□□ 0.29
RHBDD3-203ENST00000413137 LGALS3P17931 250 aaKnown RBP16.85■□□□□ 0.29
RHBDD3-203ENST00000413137 NDUFA12Q9UI09 145 aa16.85■□□□□ 0.29
RHBDD3-203ENST00000413137 SYCNQ0VAF6 134 aa16.85■□□□□ 0.29
RHBDD3-203ENST00000413137 KRTAP10-2P60368 255 aa16.84■□□□□ 0.29
RHBDD3-203ENST00000413137 NDUFA1O15239 70 aa16.83■□□□□ 0.28
RHBDD3-203ENST00000413137 CNBPP62633 177 aaKnown RBP16.83■□□□□ 0.28
RHBDD3-203ENST00000413137 C6orf48Q9UBA6 75 aa16.83■□□□□ 0.28
RHBDD3-203ENST00000413137 TP73-AS1Q9UF72 201 aa16.83■□□□□ 0.28
RHBDD3-203ENST00000413137 EREGO14944 169 aa16.82■□□□□ 0.28
RHBDD3-203ENST00000413137 C9orf116Q5BN46 136 aaPredicted RBP16.82■□□□□ 0.28
RHBDD3-203ENST00000413137 DNAH5Q8TE73 4624 aa16.82■□□□□ 0.28
RHBDD3-203ENST00000413137 CXCL5P42830 114 aa16.81■□□□□ 0.28
RHBDD3-203ENST00000413137 CARD19Q96LW7 228 aa16.81■□□□□ 0.28
RHBDD3-203ENST00000413137 LINC01620Q4KN68 170 aa16.8■□□□□ 0.28
RHBDD3-203ENST00000413137 ZNF815PA8K554 130 aa16.79■□□□□ 0.28
RHBDD3-203ENST00000413137 C14orf144Q96I85 54 aa16.79■□□□□ 0.28
RHBDD3-203ENST00000413137 MYMXA0A1B0GTQ4 84 aa16.77■□□□□ 0.28
RHBDD3-203ENST00000413137 F8WDY8 70 aa16.77■□□□□ 0.28
RHBDD3-203ENST00000413137 A0A1B0GVY2 172 aa16.77■□□□□ 0.27
RHBDD3-203ENST00000413137 S100A12P80511 92 aa16.76■□□□□ 0.27
RHBDD3-203ENST00000413137 C12orf57Q99622 126 aa16.76■□□□□ 0.27
RHBDD3-203ENST00000413137 TRBV30A0A0K0K1B3 111 aa16.75■□□□□ 0.27
RHBDD3-203ENST00000413137 COX8AP10176 69 aa16.75■□□□□ 0.27
RHBDD3-203ENST00000413137 IGLV5-52A0A0A0MRZ9 124 aa16.74■□□□□ 0.27
RHBDD3-203ENST00000413137 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.73■□□□□ 0.27
RHBDD3-203ENST00000413137 A0A0J9YXY3 114 aa16.73■□□□□ 0.27
RHBDD3-203ENST00000413137 C9orf163Q8N9P6 203 aa16.73■□□□□ 0.27
RHBDD3-203ENST00000413137 PKHD1P08F94 4074 aa16.73■□□□□ 0.27
RHBDD3-203ENST00000413137 A0A0U1RRA0 63 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 PFN2P35080 140 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 HERV-K104P63124 156 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 SFTA2Q6UW10 78 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 BOD1L2Q8IYS8 172 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 LINC00518Q8N0U6 118 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 ERG28Q9UKR5 140 aa16.72■□□□□ 0.27
RHBDD3-203ENST00000413137 RNF151Q2KHN1 245 aa16.71■□□□□ 0.27
RHBDD3-203ENST00000413137 SMIM13P0DJ93 91 aa16.69■□□□□ 0.26
RHBDD3-203ENST00000413137 PGPEP1Q9NXJ5 209 aa16.69■□□□□ 0.26
RHBDD3-203ENST00000413137 MEIG1Q5JSS6 88 aa16.68■□□□□ 0.26
RHBDD3-203ENST00000413137 PRO1933Q9H354 126 aa16.67■□□□□ 0.26
RHBDD3-203ENST00000413137 ADAMTSL4-AS1Q5T5F5 129 aa16.66■□□□□ 0.26
RHBDD3-203ENST00000413137 SDIM1Q6ZPB5 146 aa16.66■□□□□ 0.26
RHBDD3-203ENST00000413137 Q6ZRP5 223 aa16.66■□□□□ 0.26
RHBDD3-203ENST00000413137 LITAFQ99732 161 aa16.66■□□□□ 0.26
RHBDD3-203ENST00000413137 LINC00158P58513 81 aa16.65■□□□□ 0.26
RHBDD3-203ENST00000413137 SLC25A34Q6PIV7 304 aa16.65■□□□□ 0.26
RHBDD3-203ENST00000413137 SCGB1D4Q6XE38 83 aa16.65■□□□□ 0.26
RHBDD3-203ENST00000413137 DAND5Q8N907 189 aa16.65■□□□□ 0.26
RHBDD3-203ENST00000413137 DLEU1O43261 78 aa16.64■□□□□ 0.25
RHBDD3-203ENST00000413137 NDUFC2-KCTD14E9PQ53 114 aa16.64■□□□□ 0.25
RHBDD3-203ENST00000413137 RPL18AQ02543 176 aaKnown RBP16.64■□□□□ 0.25
RHBDD3-203ENST00000413137 TLX1NBP0CAT3 122 aa16.63■□□□□ 0.25
RHBDD3-203ENST00000413137 LOC107984640A0A0U1RRK4 108 aa16.62■□□□□ 0.25
RHBDD3-203ENST00000413137 COX17Q14061 63 aa16.62■□□□□ 0.25
RHBDD3-203ENST00000413137 GAGE2EQ4V326 116 aa16.62■□□□□ 0.25
RHBDD3-203ENST00000413137 GAGE2DQ9UEU5 116 aa16.62■□□□□ 0.25
RHBDD3-203ENST00000413137 GAGE2BQ13066 116 aa16.61■□□□□ 0.25
RHBDD3-203ENST00000413137 A0A096LNI7 61 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 MIR7-3HGQ8N6C7 128 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 CHTF8P0CG12 524 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 GCSHP23434 173 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 KRTAP10-1P60331 282 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 C2orf91Q6ZV80 131 aa16.6■□□□□ 0.25
RHBDD3-203ENST00000413137 DYNC1H1Q14204 4646 aaKnown RBP16.59■□□□□ 0.25
RHBDD3-203ENST00000413137 LRP1BQ9NZR2 4599 aa16.59■□□□□ 0.25
RHBDD3-203ENST00000413137 DNAH8Q96JB1 4490 aa16.59■□□□□ 0.25
RHBDD3-203ENST00000413137 PANO1I0J062 215 aa16.59■□□□□ 0.25
RHBDD3-203ENST00000413137 XAGE1AQ9HD64 81 aa16.59■□□□□ 0.25
RHBDD3-203ENST00000413137 TIMM17BO60830 172 aa16.58■□□□□ 0.24
RHBDD3-203ENST00000413137 IGKV2-24A0A0C4DH68 120 aa16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 LINC00587B1AMM8 73 aa16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 EIF4EBP3O60516 100 aaPredicted RBP16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 PTTG1IPP53801 180 aa16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 CIRBPQ14011 172 aaKnown RBP16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 SND1-IT1Q9HBX3 110 aa16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 UQCR10Q9UDW1 63 aa16.57■□□□□ 0.24
RHBDD3-203ENST00000413137 NPC2P61916 151 aa16.55■□□□□ 0.24
RHBDD3-203ENST00000413137 C9orf129Q5T035 196 aaKnown RBP16.55■□□□□ 0.24
RHBDD3-203ENST00000413137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.55■□□□□ 0.24
RHBDD3-203ENST00000413137 C16orf90A8MZG2 172 aa16.55■□□□□ 0.24
RHBDD3-203ENST00000413137 TMEM238C9JI98 176 aa16.53■□□□□ 0.24
RHBDD3-203ENST00000413137 SOSTDC1Q6X4U4 206 aa16.53■□□□□ 0.24
RHBDD3-203ENST00000413137 MIEN1Q9BRT3 115 aa16.53■□□□□ 0.24
RHBDD3-203ENST00000413137 FAM30AQ9NZY2 134 aa16.52■□□□□ 0.24
RHBDD3-203ENST00000413137 EPPK1P58107 5090 aaKnown RBP16.52■□□□□ 0.23
RHBDD3-203ENST00000413137 SPANXDQ9BXN6 97 aa16.51■□□□□ 0.23
RHBDD3-203ENST00000413137 SPANXCQ9NY87 97 aa16.51■□□□□ 0.23
RHBDD3-203ENST00000413137 HIGD1BQ9P298 99 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms