RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
PBRM1-209ENST00000412587 ACANP16112 2415 aa6.16□□□□□ -1.42
PBRM1-209ENST00000412587 KLKP1Q107X0 134 aa6.15□□□□□ -1.42
PBRM1-209ENST00000412587 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.43
PBRM1-209ENST00000412587 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.43
PBRM1-209ENST00000412587 LINC01600Q96MT4 127 aa6.15□□□□□ -1.43
PBRM1-209ENST00000412587 ZNF580Q9UK33 172 aa6.15□□□□□ -1.43
PBRM1-209ENST00000412587 BEAN1Q3B7T3 259 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 H7BZZ5 65 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 Q6ZVQ6 151 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 WFDC10AQ9H1F0 79 aa6.14□□□□□ -1.43
PBRM1-209ENST00000412587 COX7BP24311 80 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 LINC00269Q8N2A0 174 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 Q8N814 137 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 AMELXQ99217 191 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
PBRM1-209ENST00000412587 PRR9Q5T870 116 aa6.12□□□□□ -1.43
PBRM1-209ENST00000412587 CPAMD8Q8IZJ3 1885 aa6.12□□□□□ -1.43
PBRM1-209ENST00000412587 KLLNB2CW77 178 aa6.12□□□□□ -1.43
PBRM1-209ENST00000412587 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
PBRM1-209ENST00000412587 PTPRBP23467 1997 aa6.11□□□□□ -1.43
PBRM1-209ENST00000412587 NANOS2P60321 138 aaKnown RBP6.11□□□□□ -1.43
PBRM1-209ENST00000412587 REG3AQ06141 175 aa6.11□□□□□ -1.43
PBRM1-209ENST00000412587 Q6ZQY7 126 aa6.11□□□□□ -1.43
PBRM1-209ENST00000412587 RAI1Q7Z5J4 1906 aaPredicted RBP6.11□□□□□ -1.43
PBRM1-209ENST00000412587 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
PBRM1-209ENST00000412587 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
PBRM1-209ENST00000412587 COL4A2P08572 1712 aa6.1□□□□□ -1.43
PBRM1-209ENST00000412587 PROK1P58294 105 aa6.1□□□□□ -1.43
PBRM1-209ENST00000412587 TRBV6-8A0A0A6YYG3 113 aa6.09□□□□□ -1.43
PBRM1-209ENST00000412587 ADAMTS20P59510 1910 aa6.09□□□□□ -1.43
PBRM1-209ENST00000412587 ERC2-IT1O76042 136 aa6.09□□□□□ -1.43
PBRM1-209ENST00000412587 ODF3L2Q3SX64 289 aa6.09□□□□□ -1.43
PBRM1-209ENST00000412587 TRAV10A0A0B4J240 114 aa6.09□□□□□ -1.44
PBRM1-209ENST00000412587 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.44
PBRM1-209ENST00000412587 Q8N2B8 174 aa6.09□□□□□ -1.44
PBRM1-209ENST00000412587 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.44
PBRM1-209ENST00000412587 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.44
PBRM1-209ENST00000412587 ANKRD17O75179 2603 aaKnown RBP6.08□□□□□ -1.44
PBRM1-209ENST00000412587 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
PBRM1-209ENST00000412587 PRM2P04554 102 aa6.08□□□□□ -1.44
PBRM1-209ENST00000412587 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 IGHV4-30-4P0DP06 118 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 C3orf84H3BNL1 204 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 IGLV1-51P01701 117 aa6.07□□□□□ -1.44
PBRM1-209ENST00000412587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.07□□□□□ -1.44
PBRM1-209ENST00000412587 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-209ENST00000412587 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
PBRM1-209ENST00000412587 TM2D3Q9BRN9 247 aa6.06□□□□□ -1.44
PBRM1-209ENST00000412587 IGKV2-24A0A0C4DH68 120 aa6.06□□□□□ -1.44
PBRM1-209ENST00000412587 C16orf95Q9H693 158 aa6.06□□□□□ -1.44
PBRM1-209ENST00000412587 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
PBRM1-209ENST00000412587 TET2Q6N021 2002 aaPredicted RBP6.05□□□□□ -1.44
PBRM1-209ENST00000412587 LITAFQ99732 161 aa6.05□□□□□ -1.44
PBRM1-209ENST00000412587 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
PBRM1-209ENST00000412587 LINC00208Q96KT6 92 aa6.05□□□□□ -1.44
PBRM1-209ENST00000412587 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
PBRM1-209ENST00000412587 LCA10Q71F78 164 aa6.04□□□□□ -1.44
PBRM1-209ENST00000412587 F8P00451 2351 aa6.04□□□□□ -1.44
PBRM1-209ENST00000412587 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
PBRM1-209ENST00000412587 C1orf158Q8N1D5 194 aa6.04□□□□□ -1.44
PBRM1-209ENST00000412587 CYP4F30PQ9H0H9 118 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 hDV103S1A0JD37 113 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 A8MUN3 132 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 LELP1Q5T871 98 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 MUC7Q8TAX7 377 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
PBRM1-209ENST00000412587 COX6A2Q02221 97 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 IGLV5-39A0A0G2JS06 123 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 MRGPRG-AS1Q2M3A8 158 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 KIF25-AS1Q9Y6Z4 181 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 OXTP01178 125 aa6.02□□□□□ -1.45
PBRM1-209ENST00000412587 A0A0J9YWU9 116 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 H3BS24 57 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 WFDC10BQ8IUB3 73 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 COX17Q14061 63 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 CD164L2Q6UWJ8 174 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 SYCNQ0VAF6 134 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
PBRM1-209ENST00000412587 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 HECTD1Q9ULT8 2610 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
PBRM1-209ENST00000412587 IGLV2-33A0A075B6J2 118 aaPredicted RBP6□□□□□ -1.45
PBRM1-209ENST00000412587 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 TRAV22A0A0B4J277 110 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 Q9UF83 564 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 Q6ZQT0 140 aa6□□□□□ -1.45
PBRM1-209ENST00000412587 MDFIQ99750 246 aa5.99□□□□□ -1.45
PBRM1-209ENST00000412587 LINC00575Q6W349 94 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms