RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SIP14410 1827 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 LCTP09848 1927 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 COL4A5P29400 1685 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 DOCK5Q9H7D0 1870 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 ROMO1P60602 79 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 SBF1O95248 1867 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 CEP250Q9BV73 2442 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 DENND4AQ7Z401 1863 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 FREM1Q5H8C1 2179 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 PTPRZ1P23471 2315 aaPredicted RBP3.2□□□□□ -1.9
PTPN13-202ENST00000411767 CACNA1IQ9P0X4 2223 aa3.2□□□□□ -1.9
PTPN13-202ENST00000411767 Q6ZRX8 168 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 DSCAMO60469 2012 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 WDR90Q96KV7 1748 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 NYNRINQ9P2P1 1898 aaKnown RBP3.19□□□□□ -1.9
PTPN13-202ENST00000411767 BRWD1-AS2P59051 145 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 NCOA6Q14686 2063 aaPredicted RBP3.19□□□□□ -1.9
PTPN13-202ENST00000411767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.19□□□□□ -1.9
PTPN13-202ENST00000411767 A0A1B0GU33 70 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 PROK1P58294 105 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 C9orf163Q8N9P6 203 aa3.19□□□□□ -1.9
PTPN13-202ENST00000411767 ST20-AS1Q8NBB2 130 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 CACNA1BQ00975 2339 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 DSCAML1Q8TD84 2053 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 GOLGB1Q14789 3259 aaKnown RBP3.18□□□□□ -1.9
PTPN13-202ENST00000411767 Q6ZS46 218 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 AGRNO00468 2067 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
PTPN13-202ENST00000411767 M0R2T5 61 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 Q6ZSV7 163 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 K7EQZ3 153 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 VWA8A3KMH1 1905 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 MGAMO43451 1857 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 C18orf65Q6ZTR6 163 aa3.17□□□□□ -1.9
PTPN13-202ENST00000411767 PLXND1Q9Y4D7 1925 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 HCFC1P51610 2035 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 A0A1W2PNM2 257 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 CDSNQ15517 529 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 Q6ZRU5 148 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 ZSWIM8A7E2V4 1837 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 TNCP24821 2201 aa3.16□□□□□ -1.9
PTPN13-202ENST00000411767 A0A1W2PNN7 141 aa3.15□□□□□ -1.9
PTPN13-202ENST00000411767 PLXNA1Q9UIW2 1896 aa3.15□□□□□ -1.9
PTPN13-202ENST00000411767 KLKP1Q107X0 134 aa3.15□□□□□ -1.9
PTPN13-202ENST00000411767 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.9
PTPN13-202ENST00000411767 MED12LQ86YW9 2145 aa3.15□□□□□ -1.9
PTPN13-202ENST00000411767 ITGBL1O95965 494 aaPredicted RBP3.15□□□□□ -1.91
PTPN13-202ENST00000411767 GRNP28799 593 aaKnown RBP3.15□□□□□ -1.91
PTPN13-202ENST00000411767 PRR14LQ5THK1 2151 aa3.15□□□□□ -1.91
PTPN13-202ENST00000411767 IGIPA6NJ69 53 aa3.15□□□□□ -1.91
PTPN13-202ENST00000411767 OBSL1O75147 1896 aa3.15□□□□□ -1.91
PTPN13-202ENST00000411767 KLLNB2CW77 178 aa3.15□□□□□ -1.91
PTPN13-202ENST00000411767 PRR3P79522 188 aaKnown RBP3.14□□□□□ -1.91
PTPN13-202ENST00000411767 Q75L30 129 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 EML5Q05BV3 1969 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 Q6ZSA8 131 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 TET1Q8NFU7 2136 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 PSMG3-AS1Q96PY0 264 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 CSAG1Q6PB30 78 aa3.14□□□□□ -1.91
PTPN13-202ENST00000411767 MAP1BP46821 2468 aaKnown RBP3.13□□□□□ -1.91
PTPN13-202ENST00000411767 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 MALRD1Q5VYJ5 2156 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 NUP210LQ5VU65 1888 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 ATRXP46100 2492 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 WNK1Q9H4A3 2382 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 FRMPD3Q5JV73 1810 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 DENND4CQ5VZ89 1909 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 Q8N9P0 234 aaPredicted RBP3.13□□□□□ -1.91
PTPN13-202ENST00000411767 PTPRDP23468 1912 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 DSCR10P59022 87 aa3.13□□□□□ -1.91
PTPN13-202ENST00000411767 PLCE1Q9P212 2302 aa3.12□□□□□ -1.91
PTPN13-202ENST00000411767 TET2Q6N021 2002 aaPredicted RBP3.12□□□□□ -1.91
PTPN13-202ENST00000411767 F5P12259 2224 aa3.12□□□□□ -1.91
PTPN13-202ENST00000411767 DEFB1P60022 68 aa3.12□□□□□ -1.91
PTPN13-202ENST00000411767 CNFNQ9BYD5 112 aa3.12□□□□□ -1.91
PTPN13-202ENST00000411767 C10orf99Q6UWK7 81 aa3.12□□□□□ -1.91
PTPN13-202ENST00000411767 P0C880 135 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 PROK2Q9HC23 129 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 FP248Q71RG6 208 aaPredicted RBP3.11□□□□□ -1.91
PTPN13-202ENST00000411767 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 ARHGAP21Q5T5U3 1957 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 INAFM1C9JVW0 142 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 PKDREJQ9NTG1 2253 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 FBXL19-AS1Q494R0 122 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 LINC00528Q8N1L1 170 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 Q8NAQ8 132 aa3.11□□□□□ -1.91
PTPN13-202ENST00000411767 S4R3F8 94 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 ADAMTSL4-AS1Q5T5F5 129 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 LITAFQ99732 161 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 PRR34Q9NV39 138 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 IGFL2Q6UWQ7 119 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 R4GN34 69 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 H3BNG1 76 aa3.1□□□□□ -1.91
PTPN13-202ENST00000411767 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms