RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CR1P17927 2039 aa8.14□□□□□ -1.11
PRPF40A-202ENST00000410080 TLN2Q9Y4G6 2542 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 CRYGAP11844 174 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 BEAN1Q3B7T3 259 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 Q8IZM0 81 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 H0Y9P7 68 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
PRPF40A-202ENST00000410080 SERTAD4-AS1Q5TG53 156 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 C11orf1Q9H5F2 150 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 MRPS12O15235 138 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 RNASE3P12724 160 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 F8P00451 2351 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 KRTAP10-9P60411 292 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 PRO3102Q9H379 93 aa8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-202ENST00000410080 P0C879 139 aa8.11□□□□□ -1.11
PRPF40A-202ENST00000410080 LINC00574Q9H8X3 128 aa8.11□□□□□ -1.11
PRPF40A-202ENST00000410080 CENPFP49454 3210 aa8.1□□□□□ -1.11
PRPF40A-202ENST00000410080 PRR9Q5T870 116 aa8.1□□□□□ -1.11
PRPF40A-202ENST00000410080 C16orf90A8MZG2 172 aa8.1□□□□□ -1.11
PRPF40A-202ENST00000410080 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
PRPF40A-202ENST00000410080 EIF4EBP1Q13541 118 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 PSPHP1O15172 72 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 hDV103S1A0JD37 113 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 HCG22E2RYF7 251 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 NRACQ8N912 160 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 MDFIQ99750 246 aa8.09□□□□□ -1.11
PRPF40A-202ENST00000410080 CHTF8P0CG12 524 aa8.09□□□□□ -1.12
PRPF40A-202ENST00000410080 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.12
PRPF40A-202ENST00000410080 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
PRPF40A-202ENST00000410080 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
PRPF40A-202ENST00000410080 Q8N814 137 aa8.08□□□□□ -1.12
PRPF40A-202ENST00000410080 MRPS36P82909 103 aaKnown RBP8.08□□□□□ -1.12
PRPF40A-202ENST00000410080 ZNF295-AS1Q8N0V1 137 aa8.07□□□□□ -1.12
PRPF40A-202ENST00000410080 MOBPQ13875 183 aa8.07□□□□□ -1.12
PRPF40A-202ENST00000410080 AVPP01185 164 aa8.07□□□□□ -1.12
PRPF40A-202ENST00000410080 BPTFQ12830 3046 aa8.06□□□□□ -1.12
PRPF40A-202ENST00000410080 A0A087WSZ3 146 aa8.06□□□□□ -1.12
PRPF40A-202ENST00000410080 VPREB1P12018 145 aa8.06□□□□□ -1.12
PRPF40A-202ENST00000410080 Q6JHZ5 121 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 A8MTW9 85 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 A0A087WYN8 130 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 EGFEM1PQ0D2K5 195 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 Q9UF83 564 aa8.05□□□□□ -1.12
PRPF40A-202ENST00000410080 NTM-AS1Q6ZSK4 140 aa8.04□□□□□ -1.12
PRPF40A-202ENST00000410080 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
PRPF40A-202ENST00000410080 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 KLLNB2CW77 178 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 FHL3Q13643 280 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 ABCA12Q86UK0 2595 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 FSTL3O95633 263 aa8.03□□□□□ -1.12
PRPF40A-202ENST00000410080 MUC7Q8TAX7 377 aa8.02□□□□□ -1.12
PRPF40A-202ENST00000410080 LYPD5Q6UWN5 251 aa8.02□□□□□ -1.13
PRPF40A-202ENST00000410080 FHL2Q14192 279 aa8.02□□□□□ -1.13
PRPF40A-202ENST00000410080 UTRNP46939 3433 aa8.02□□□□□ -1.13
PRPF40A-202ENST00000410080 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 Q8N6K4 173 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 IGLV1-51P01701 117 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 GAS8-AS1O95177 125 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 LINC00242Q5T6M2 205 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 IGF2RP11717 2491 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
PRPF40A-202ENST00000410080 ODF3L2Q3SX64 289 aa7.99□□□□□ -1.13
PRPF40A-202ENST00000410080 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
PRPF40A-202ENST00000410080 ACYP2P14621 99 aa7.99□□□□□ -1.13
PRPF40A-202ENST00000410080 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
PRPF40A-202ENST00000410080 COX7CP15954 63 aa7.98□□□□□ -1.13
PRPF40A-202ENST00000410080 A0A1B0GU69 56 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 Q6ZRU5 148 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 SMCR5Q8TEV8 140 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 C16orf95Q9H693 158 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
PRPF40A-202ENST00000410080 LINC00313P59037 77 aa7.96□□□□□ -1.13
PRPF40A-202ENST00000410080 NAV2Q8IVL1 2488 aa7.96□□□□□ -1.14
PRPF40A-202ENST00000410080 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
PRPF40A-202ENST00000410080 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 SPAG11AQ6PDA7 123 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 F8WDY8 70 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 PIEZO1Q92508 2521 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 Q96NJ1 140 aa7.95□□□□□ -1.14
PRPF40A-202ENST00000410080 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
PRPF40A-202ENST00000410080 USP9XQ93008 2570 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-202ENST00000410080 Q8N3U1 123 aa7.94□□□□□ -1.14
PRPF40A-202ENST00000410080 RTL8CO15255 209 aa7.93□□□□□ -1.14
PRPF40A-202ENST00000410080 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-202ENST00000410080 Q6ZSN1 163 aa7.92□□□□□ -1.14
PRPF40A-202ENST00000410080 PHF5AQ7RTV0 110 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms