RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 IGHV3-49A0A0A0MS15 119 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 K7EMT4 169 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 RS1O15537 224 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 ECSCRQ19T08 205 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
NIF3L1-204ENST00000409357 TRBV12-3P01733 135 aa7.61□□□□□ -1.19
NIF3L1-204ENST00000409357 RNASE1P07998 156 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-204ENST00000409357 USMG5Q96IX5 58 aa7.61□□□□□ -1.19
NIF3L1-204ENST00000409357 C1orf43Q9BWL3 253 aa7.61□□□□□ -1.19
NIF3L1-204ENST00000409357 A0A087WVE0 104 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 CRPP02741 224 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 A8MZ25 164 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 IGHV4-59P01825 116 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 Q6YL49 198 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 V9GYY9 64 aa7.6□□□□□ -1.19
NIF3L1-204ENST00000409357 SAA4P35542 130 aa7.59□□□□□ -1.19
NIF3L1-204ENST00000409357 SEC61GP60059 68 aa7.59□□□□□ -1.19
NIF3L1-204ENST00000409357 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-204ENST00000409357 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
NIF3L1-204ENST00000409357 F6UB75 175 aa7.58□□□□□ -1.2
NIF3L1-204ENST00000409357 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
NIF3L1-204ENST00000409357 CFHR3Q02985 330 aa7.58□□□□□ -1.2
NIF3L1-204ENST00000409357 UNQ9165/PRO28630Q6UXU0 137 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 DEFB104AQ8WTQ1 72 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 Q9HAA7 133 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 G3V318 75 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 LINC00242Q5T6M2 205 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 C5orf56Q8N8D9 126 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 RHPN1-AS1Q9BWJ2 59 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
NIF3L1-204ENST00000409357 TGP01266 2768 aa7.56□□□□□ -1.2
NIF3L1-204ENST00000409357 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
NIF3L1-204ENST00000409357 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
NIF3L1-204ENST00000409357 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-204ENST00000409357 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
NIF3L1-204ENST00000409357 LAMTOR3Q9UHA4 124 aa7.55□□□□□ -1.2
NIF3L1-204ENST00000409357 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 A0A087WYN8 130 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 DEFB1P60022 68 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 KRTAP10-3P60369 221 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 SS18Q15532 418 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 LINC00467Q9BRT7 94 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 A0A1W2PRX2 142 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 ERC2-IT1O76042 136 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 IGHV3-53P01767 116 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 COX6A2Q02221 97 aa7.54□□□□□ -1.2
NIF3L1-204ENST00000409357 IGKV2-29A2NJV5 120 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 A8MTW9 85 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 H3BUX3 64 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 TMEM256-PLSCR3K7ERE1 68 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 LY6EQ16553 131 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 LINC01006Q8NI28 216 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
NIF3L1-204ENST00000409357 PRKDCP78527 4128 aaKnown RBP7.52□□□□□ -1.2
NIF3L1-204ENST00000409357 TRAV23DV6A0A075B6W5 121 aa7.52□□□□□ -1.21
NIF3L1-204ENST00000409357 BLCAPP62952 87 aa7.52□□□□□ -1.21
NIF3L1-204ENST00000409357 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
NIF3L1-204ENST00000409357 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
NIF3L1-204ENST00000409357 MOB4Q9Y3A3 225 aa7.52□□□□□ -1.21
NIF3L1-204ENST00000409357 C1orf158Q8N1D5 194 aa7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 NCR3O14931 201 aa7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 LECT2O14960 151 aa7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 SNRPD3P62318 126 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 CXCL6P80162 114 aa7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-204ENST00000409357 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 TRBV7-6A0A0J9YX20 115 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 H3BQ85 93 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 K7EQG2 157 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 PROK1P58294 105 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 ENHOQ6UWT2 76 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
NIF3L1-204ENST00000409357 LOC110117498A0A087WWA1 95 aa7.49□□□□□ -1.21
NIF3L1-204ENST00000409357 PKIGQ9Y2B9 76 aa7.49□□□□□ -1.21
NIF3L1-204ENST00000409357 PDE6GP18545 87 aa7.48□□□□□ -1.21
NIF3L1-204ENST00000409357 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
NIF3L1-204ENST00000409357 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
NIF3L1-204ENST00000409357 TRBV6-4A0A1B0GX49 114 aa7.47□□□□□ -1.21
NIF3L1-204ENST00000409357 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
NIF3L1-204ENST00000409357 IGLV1-40P01703 118 aa7.47□□□□□ -1.21
NIF3L1-204ENST00000409357 CCL18P55774 89 aa7.47□□□□□ -1.21
NIF3L1-204ENST00000409357 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
NIF3L1-204ENST00000409357 A6NDX4 124 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 F8WEM9 126 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 K7EQD1 137 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 C11orf44Q8N8P7 122 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 ZNF702PQ9H963 129 aa7.46□□□□□ -1.22
NIF3L1-204ENST00000409357 A0A0U1RRA0 63 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms