RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
SSB-202ENST00000409333 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
SSB-202ENST00000409333 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
SSB-202ENST00000409333 DLEU1O43261 78 aa11.06□□□□□ -0.64
SSB-202ENST00000409333 UQCR10Q9UDW1 63 aa11.06□□□□□ -0.64
SSB-202ENST00000409333 CKS1BP61024 79 aa11.05□□□□□ -0.64
SSB-202ENST00000409333 NTN5Q8WTR8 489 aaPredicted RBP11.05□□□□□ -0.64
SSB-202ENST00000409333 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
SSB-202ENST00000409333 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
SSB-202ENST00000409333 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
SSB-202ENST00000409333 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
SSB-202ENST00000409333 FAT2Q9NYQ8 4349 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 CXCL5P42830 114 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 C2orf91Q6ZV80 131 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 RYR2Q92736 4967 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
SSB-202ENST00000409333 CTAG1AP78358 180 aa11.02□□□□□ -0.65
SSB-202ENST00000409333 CAMK2N2Q96S95 79 aa11.02□□□□□ -0.65
SSB-202ENST00000409333 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
SSB-202ENST00000409333 SLPIP03973 132 aa11□□□□□ -0.65
SSB-202ENST00000409333 HERV-K104P63124 156 aa11□□□□□ -0.65
SSB-202ENST00000409333 SFTA2Q6UW10 78 aa11□□□□□ -0.65
SSB-202ENST00000409333 Q6ZRU5 148 aa11□□□□□ -0.65
SSB-202ENST00000409333 RTL8CO15255 209 aa11□□□□□ -0.65
SSB-202ENST00000409333 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
SSB-202ENST00000409333 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
SSB-202ENST00000409333 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
SSB-202ENST00000409333 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
SSB-202ENST00000409333 C6orf48Q9UBA6 75 aa10.99□□□□□ -0.65
SSB-202ENST00000409333 A0A087WTM6 91 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 A0A0U1RRA0 63 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 PCP4L1A6NKN8 68 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 DNAH11Q96DT5 4516 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.98□□□□□ -0.65
SSB-202ENST00000409333 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 C14orf177Q52M58 125 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 LITAFQ99732 161 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
SSB-202ENST00000409333 DDTP30046 118 aa10.97□□□□□ -0.65
SSB-202ENST00000409333 PFN2P35080 140 aa10.97□□□□□ -0.65
SSB-202ENST00000409333 F8WDY8 70 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 TNP2Q05952 138 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 ADAMTSL4-AS1Q5T5F5 129 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 Q8N814 137 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 DAND5Q8N907 189 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 CARD19Q96LW7 228 aa10.96□□□□□ -0.65
SSB-202ENST00000409333 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
SSB-202ENST00000409333 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
SSB-202ENST00000409333 TIMM17BO60830 172 aa10.93□□□□□ -0.66
SSB-202ENST00000409333 LINC00158P58513 81 aa10.93□□□□□ -0.66
SSB-202ENST00000409333 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
SSB-202ENST00000409333 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
SSB-202ENST00000409333 PKD1P98161 4303 aa10.93□□□□□ -0.66
SSB-202ENST00000409333 SPANXB1Q9NS25 103 aaPredicted RBP10.93□□□□□ -0.66
SSB-202ENST00000409333 NPC2P61916 151 aa10.92□□□□□ -0.66
SSB-202ENST00000409333 DNAH5Q8TE73 4624 aa10.91□□□□□ -0.66
SSB-202ENST00000409333 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
SSB-202ENST00000409333 SRSF9Q13242 221 aaKnown RBP eCLIP10.91□□□□□ -0.66
SSB-202ENST00000409333 COX17Q14061 63 aa10.91□□□□□ -0.66
SSB-202ENST00000409333 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
SSB-202ENST00000409333 HIST1H4GQ99525 98 aa10.91□□□□□ -0.66
SSB-202ENST00000409333 SPANXDQ9BXN6 97 aa10.9□□□□□ -0.66
SSB-202ENST00000409333 SPANXCQ9NY87 97 aa10.9□□□□□ -0.66
SSB-202ENST00000409333 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.67
SSB-202ENST00000409333 FUSP35637 526 aaKnown RBP eCLIP10.9□□□□□ -0.67
SSB-202ENST00000409333 RNF151Q2KHN1 245 aa10.9□□□□□ -0.67
SSB-202ENST00000409333 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
SSB-202ENST00000409333 RYR3Q15413 4870 aa10.88□□□□□ -0.67
SSB-202ENST00000409333 HSD52Q0P140 79 aa10.88□□□□□ -0.67
SSB-202ENST00000409333 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
SSB-202ENST00000409333 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
SSB-202ENST00000409333 EREGO14944 169 aa10.87□□□□□ -0.67
SSB-202ENST00000409333 TAL2Q16559 108 aa10.87□□□□□ -0.67
SSB-202ENST00000409333 LINC01620Q4KN68 170 aa10.87□□□□□ -0.67
SSB-202ENST00000409333 Q6ZRP5 223 aa10.87□□□□□ -0.67
SSB-202ENST00000409333 MUSTN1Q8IVN3 82 aa10.87□□□□□ -0.67
SSB-202ENST00000409333 GCSHP23434 173 aa10.86□□□□□ -0.67
SSB-202ENST00000409333 RPL18AQ02543 176 aaKnown RBP10.86□□□□□ -0.67
SSB-202ENST00000409333 Q6ZVH6 145 aa10.86□□□□□ -0.67
SSB-202ENST00000409333 CEND1Q8N111 149 aa10.86□□□□□ -0.67
SSB-202ENST00000409333 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
SSB-202ENST00000409333 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
SSB-202ENST00000409333 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
SSB-202ENST00000409333 HINT1P49773 126 aaPredicted RBP10.85□□□□□ -0.67
SSB-202ENST00000409333 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
SSB-202ENST00000409333 C9orf163Q8N9P6 203 aa10.85□□□□□ -0.67
SSB-202ENST00000409333 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
SSB-202ENST00000409333 XAGE1AQ9HD64 81 aa10.84□□□□□ -0.67
SSB-202ENST00000409333 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
SSB-202ENST00000409333 FXYD2P54710 66 aa10.83□□□□□ -0.68
SSB-202ENST00000409333 IFITM1P13164 125 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 PTTG1IPP53801 180 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 KRTAP10-2P60368 255 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
SSB-202ENST00000409333 C9orf129Q5T035 196 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms