RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
LSM5-202ENST00000409292 SEC11AP67812 179 aa4.59□□□□□ -1.67
LSM5-202ENST00000409292 FAM74A3Q4VXF1 159 aa4.59□□□□□ -1.67
LSM5-202ENST00000409292 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
LSM5-202ENST00000409292 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
LSM5-202ENST00000409292 C22orf24Q9Y442 160 aa4.59□□□□□ -1.67
LSM5-202ENST00000409292 IGKV2D-26A0A0A0MRZ7 120 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 BCE1O60756 84 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 UBE2AP49459 152 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 PAPPA-AS1Q5QFB9 102 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
LSM5-202ENST00000409292 C2orf82Q6UX34 121 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 MRPL55Q7Z7F7 128 aaKnown RBP4.58□□□□□ -1.68
LSM5-202ENST00000409292 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
LSM5-202ENST00000409292 VCX2Q9H322 139 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 PYGO1Q9Y3Y4 419 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 LPAP08519 4548 aa4.58□□□□□ -1.68
LSM5-202ENST00000409292 D6R8Y8 96 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 G0S2P27469 103 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 CXCL5P42830 114 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 CTAG1AP78358 180 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 KIAA0087Q14695 138 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 LINC00242Q5T6M2 205 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 ORMDL3Q8N138 153 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 V9GYV3 84 aa4.57□□□□□ -1.68
LSM5-202ENST00000409292 IGLV7-46A0A075B6I9 117 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 ADIRFQ15847 76 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 LINC00173Q6ZV60 143 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 Q8IZM0 81 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 TCTE3Q8IZS6 198 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 LINC00469Q8N7U9 141 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 NKAPP1Q8N9T2 125 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 GEMIN7Q9H840 131 aaKnown RBP4.56□□□□□ -1.68
LSM5-202ENST00000409292 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 CYSLTR1Q9Y271 337 aa4.56□□□□□ -1.68
LSM5-202ENST00000409292 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 F8VRH5 84 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 NPSP0C0P6 89 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 HERVK_113P63121 156 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 ALKAL2Q6UX46 152 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 TMEM136Q6ZRR5 245 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 KRTAP7-1Q8IUC3 87 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 NAT8Q9UHE5 227 aa4.55□□□□□ -1.68
LSM5-202ENST00000409292 A0A087X002 238 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 SMIM27A0A1W2PRY6 76 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 NPYP01303 97 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
LSM5-202ENST00000409292 ORMDL2Q53FV1 153 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
LSM5-202ENST00000409292 LINC00337Q8N6G1 96 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 PRELID3AQ96N28 172 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 MAP1LC3AQ9H492 121 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 LAMTOR2Q9Y2Q5 125 aa4.54□□□□□ -1.68
LSM5-202ENST00000409292 K7EMI3 77 aa4.53□□□□□ -1.68
LSM5-202ENST00000409292 SRP19P09132 144 aaKnown RBP4.53□□□□□ -1.68
LSM5-202ENST00000409292 RPL23P62829 140 aaKnown RBP4.53□□□□□ -1.68
LSM5-202ENST00000409292 C2orf66Q6UXQ4 117 aa4.53□□□□□ -1.68
LSM5-202ENST00000409292 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
LSM5-202ENST00000409292 LOC389332A0A1B0GUA5 103 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 GAGE10A6NGK3 116 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 RPL37AP8A6NKH3 93 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 PEA15Q15121 130 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 SPAG11AQ6PDA7 123 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 ATP5L2Q7Z4Y8 100 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 LINC00167Q96N53 147 aa4.52□□□□□ -1.69
LSM5-202ENST00000409292 MUC2Q02817 5179 aa4.51□□□□□ -1.69
LSM5-202ENST00000409292 AKAP14Q86UN6 197 aa4.51□□□□□ -1.69
LSM5-202ENST00000409292 A0A1B0GVG6 124 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 ATP5LO75964 103 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
LSM5-202ENST00000409292 Q8N8P6 123 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 AMELXQ99217 191 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 GNB1LQ9BYB4 327 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
LSM5-202ENST00000409292 ANAPC11Q9NYG5 84 aa4.5□□□□□ -1.69
LSM5-202ENST00000409292 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 LINC01549A6NIU2 74 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 PRSS47A8MTI9 375 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
LSM5-202ENST00000409292 PNRC1Q12796 327 aaPredicted RBP4.49□□□□□ -1.69
LSM5-202ENST00000409292 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 FAM19A1Q7Z5A9 133 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 CDKN2A-AS1Q9UH64 79 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 NDUFA12Q9UI09 145 aa4.49□□□□□ -1.69
LSM5-202ENST00000409292 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 H3BRM9 83 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
LSM5-202ENST00000409292 RAB5BP61020 215 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
LSM5-202ENST00000409292 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms