RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 COX6A2Q02221 97 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 ORAOV1Q8WV07 137 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 CHAC1Q9BUX1 264 aa6.89□□□□□ -1.31
RPAIN-204ENST00000405578 F8VRH5 84 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 GCSHP23434 173 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 DDTP30046 118 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
RPAIN-204ENST00000405578 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 PKIGQ9Y2B9 76 aa6.88□□□□□ -1.31
RPAIN-204ENST00000405578 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 F8WDY8 70 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 HAMPP81172 84 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
RPAIN-204ENST00000405578 PLNP26678 52 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 CKS1BP61024 79 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
RPAIN-204ENST00000405578 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
RPAIN-204ENST00000405578 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 DPM2O94777 84 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 ODF1Q14990 250 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 HIST3H2BBQ8N257 126 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
RPAIN-204ENST00000405578 A0A1B0GV90 55 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 C20orf202A1L168 122 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-204ENST00000405578 NDUFA1O15239 70 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 ZNF22P17026 224 aaPredicted RBP6.84□□□□□ -1.31
RPAIN-204ENST00000405578 CXCL5P42830 114 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 KRTDAPP60985 99 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 Q8IZM0 81 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 C9orf163Q8N9P6 203 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 LINC00526Q96FQ7 95 aa6.84□□□□□ -1.31
RPAIN-204ENST00000405578 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
RPAIN-204ENST00000405578 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
RPAIN-204ENST00000405578 IGKCP01834 107 aa6.82□□□□□ -1.32
RPAIN-204ENST00000405578 SLPIP03973 132 aa6.82□□□□□ -1.32
RPAIN-204ENST00000405578 HERVK_113P61574 105 aa6.82□□□□□ -1.32
RPAIN-204ENST00000405578 JOSD1Q15040 202 aaPredicted RBP6.82□□□□□ -1.32
RPAIN-204ENST00000405578 SFTA2Q6UW10 78 aa6.82□□□□□ -1.32
RPAIN-204ENST00000405578 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
RPAIN-204ENST00000405578 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
RPAIN-204ENST00000405578 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
RPAIN-204ENST00000405578 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
RPAIN-204ENST00000405578 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
RPAIN-204ENST00000405578 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
RPAIN-204ENST00000405578 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 LINC01620Q4KN68 170 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 Q6ZRU5 148 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
RPAIN-204ENST00000405578 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
RPAIN-204ENST00000405578 C2orf82Q6UX34 121 aa6.79□□□□□ -1.32
RPAIN-204ENST00000405578 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
RPAIN-204ENST00000405578 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
RPAIN-204ENST00000405578 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
RPAIN-204ENST00000405578 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
RPAIN-204ENST00000405578 RPL18AQ02543 176 aaKnown RBP6.77□□□□□ -1.33
RPAIN-204ENST00000405578 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
RPAIN-204ENST00000405578 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
RPAIN-204ENST00000405578 M0R143 59 aa6.76□□□□□ -1.33
RPAIN-204ENST00000405578 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
RPAIN-204ENST00000405578 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
RPAIN-204ENST00000405578 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 LEPROTO15243 131 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
RPAIN-204ENST00000405578 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
RPAIN-204ENST00000405578 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 Q6ZSA8 131 aa6.75□□□□□ -1.33
RPAIN-204ENST00000405578 MYMXA0A1B0GTQ4 84 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 E9PLD3 99 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 J3QQQ9 107 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
RPAIN-204ENST00000405578 NMUP48645 174 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 HERV-K104P63124 156 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 MAJINQ3KP22 176 aa6.74□□□□□ -1.33
RPAIN-204ENST00000405578 NDUFA12Q9UI09 145 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms