RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 COL4A4P53420 1690 aaPredicted RBP7.99□□□□□ -1.13
CACNA1C-217ENST00000399641 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 CDSNQ15517 529 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 FSTL3O95633 263 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 FHL3Q13643 280 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 BDP1A6H8Y1 2624 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 OBSL1O75147 1896 aa7.98□□□□□ -1.13
CACNA1C-217ENST00000399641 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 COX17Q14061 63 aa7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 ANAPC1Q9H1A4 1944 aa7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 PRRC2AP48634 2157 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 AVPP01185 164 aa7.97□□□□□ -1.13
CACNA1C-217ENST00000399641 ZNF575Q86XF7 245 aa7.96□□□□□ -1.13
CACNA1C-217ENST00000399641 ARHGAP21Q5T5U3 1957 aa7.96□□□□□ -1.14
CACNA1C-217ENST00000399641 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
CACNA1C-217ENST00000399641 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
CACNA1C-217ENST00000399641 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
CACNA1C-217ENST00000399641 NOTCH4Q99466 2003 aa7.95□□□□□ -1.14
CACNA1C-217ENST00000399641 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
CACNA1C-217ENST00000399641 C2orf16Q68DN1 1984 aa7.94□□□□□ -1.14
CACNA1C-217ENST00000399641 PLXNB3Q9ULL4 1909 aa7.94□□□□□ -1.14
CACNA1C-217ENST00000399641 LINC00313P59037 77 aa7.94□□□□□ -1.14
CACNA1C-217ENST00000399641 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
CACNA1C-217ENST00000399641 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
CACNA1C-217ENST00000399641 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
CACNA1C-217ENST00000399641 Q8IZM0 81 aa7.92□□□□□ -1.14
CACNA1C-217ENST00000399641 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
CACNA1C-217ENST00000399641 P0C879 139 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 HIVEP3Q5T1R4 2406 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 FREM1Q5H8C1 2179 aa7.91□□□□□ -1.14
CACNA1C-217ENST00000399641 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
CACNA1C-217ENST00000399641 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
CACNA1C-217ENST00000399641 IGLV1-40P01703 118 aa7.9□□□□□ -1.15
CACNA1C-217ENST00000399641 COL4A3Q01955 1670 aa7.9□□□□□ -1.15
CACNA1C-217ENST00000399641 CRIP1P50238 77 aa7.9□□□□□ -1.15
CACNA1C-217ENST00000399641 PRR9Q5T870 116 aa7.89□□□□□ -1.15
CACNA1C-217ENST00000399641 ZNF106Q9H2Y7 1883 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-217ENST00000399641 ACACBO00763 2458 aa7.88□□□□□ -1.15
CACNA1C-217ENST00000399641 SORL1Q92673 2214 aa7.88□□□□□ -1.15
CACNA1C-217ENST00000399641 NCOA6Q14686 2063 aaPredicted RBP7.88□□□□□ -1.15
CACNA1C-217ENST00000399641 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
CACNA1C-217ENST00000399641 CDC42SE2Q9NRR3 84 aa7.88□□□□□ -1.15
CACNA1C-217ENST00000399641 CCDC168Q8NDH2 2452 aa7.87□□□□□ -1.15
CACNA1C-217ENST00000399641 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
CACNA1C-217ENST00000399641 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
CACNA1C-217ENST00000399641 SPG11Q96JI7 2443 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 PCNTO95613 3336 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 DENND4CQ5VZ89 1909 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 CSPG4Q6UVK1 2322 aa7.86□□□□□ -1.15
CACNA1C-217ENST00000399641 Q6ZRU5 148 aa7.85□□□□□ -1.15
CACNA1C-217ENST00000399641 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
CACNA1C-217ENST00000399641 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
CACNA1C-217ENST00000399641 LINC00846Q9NV44 126 aa7.85□□□□□ -1.15
CACNA1C-217ENST00000399641 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
CACNA1C-217ENST00000399641 RTL8CO15255 209 aa7.84□□□□□ -1.15
CACNA1C-217ENST00000399641 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.15
CACNA1C-217ENST00000399641 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.16
CACNA1C-217ENST00000399641 SPATA3Q8NHX4 192 aa7.83□□□□□ -1.16
CACNA1C-217ENST00000399641 TANC2Q9HCD6 1990 aa7.83□□□□□ -1.16
CACNA1C-217ENST00000399641 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
CACNA1C-217ENST00000399641 LINC00574Q9H8X3 128 aa7.82□□□□□ -1.16
CACNA1C-217ENST00000399641 EIF4EBP1Q13541 118 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-217ENST00000399641 TRAV22A0A0B4J277 110 aa7.81□□□□□ -1.16
CACNA1C-217ENST00000399641 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
CACNA1C-217ENST00000399641 MUC4Q99102 2169 aa7.81□□□□□ -1.16
CACNA1C-217ENST00000399641 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
CACNA1C-217ENST00000399641 TSPEAR-AS2P59090 65 aa7.8□□□□□ -1.16
CACNA1C-217ENST00000399641 Q6ZQT0 140 aa7.8□□□□□ -1.16
CACNA1C-217ENST00000399641 A8MUN3 132 aa7.79□□□□□ -1.16
CACNA1C-217ENST00000399641 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
CACNA1C-217ENST00000399641 CEP192Q8TEP8 1941 aa7.79□□□□□ -1.16
CACNA1C-217ENST00000399641 CRIP3Q6Q6R5 217 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 DSCR10P59022 87 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 CENPFP49454 3210 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 K7EQZ3 153 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 C8orf17Q9NRJ1 99 aa7.78□□□□□ -1.16
CACNA1C-217ENST00000399641 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 Q6ZRP5 223 aa7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 COA5Q86WW8 74 aa7.77□□□□□ -1.17
CACNA1C-217ENST00000399641 LTBP2Q14767 1821 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 F8WDY8 70 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 Q6ZPA2 131 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 KIAA1549LQ6ZVL6 1849 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 BRWD1-AS2P59051 145 aa7.76□□□□□ -1.17
CACNA1C-217ENST00000399641 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms