RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 KRTAP19-2Q3LHN2 52 aa10.13□□□□□ -0.79
UFD1-202ENST00000399523 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
UFD1-202ENST00000399523 D6R8Y8 96 aa10.12□□□□□ -0.79
UFD1-202ENST00000399523 CEBPGP53567 150 aa10.12□□□□□ -0.79
UFD1-202ENST00000399523 C2orf88Q9BSF0 95 aa10.12□□□□□ -0.79
UFD1-202ENST00000399523 RAB5AP20339 215 aa10.11□□□□□ -0.79
UFD1-202ENST00000399523 PRLHP81277 87 aa10.11□□□□□ -0.79
UFD1-202ENST00000399523 PLEKHB2Q96CS7 222 aa10.11□□□□□ -0.79
UFD1-202ENST00000399523 SMIM7Q9BQ49 75 aa10.11□□□□□ -0.79
UFD1-202ENST00000399523 AMELXQ99217 191 aa10.1□□□□□ -0.79
UFD1-202ENST00000399523 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
UFD1-202ENST00000399523 FAM74A3Q4VXF1 159 aa10.09□□□□□ -0.79
UFD1-202ENST00000399523 ZC2HC1BQ5TFG8 222 aa10.09□□□□□ -0.79
UFD1-202ENST00000399523 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
UFD1-202ENST00000399523 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
UFD1-202ENST00000399523 A0A1B0GW15 77 aa10.08□□□□□ -0.8
UFD1-202ENST00000399523 CXCL5P42830 114 aa10.08□□□□□ -0.8
UFD1-202ENST00000399523 RGS21Q2M5E4 152 aa10.08□□□□□ -0.8
UFD1-202ENST00000399523 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
UFD1-202ENST00000399523 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
UFD1-202ENST00000399523 KRTAP9-7A8MTY7 169 aa10.07□□□□□ -0.8
UFD1-202ENST00000399523 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
UFD1-202ENST00000399523 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
UFD1-202ENST00000399523 SMIM27A0A1W2PRY6 76 aa10.06□□□□□ -0.8
UFD1-202ENST00000399523 PPBPP02775 128 aa10.06□□□□□ -0.8
UFD1-202ENST00000399523 FAM19A1Q7Z5A9 133 aa10.06□□□□□ -0.8
UFD1-202ENST00000399523 VCX2Q9H322 139 aa10.06□□□□□ -0.8
UFD1-202ENST00000399523 CDKN2A-AS1Q9UH64 79 aa10.06□□□□□ -0.8
UFD1-202ENST00000399523 SCO1O75880 301 aa10.05□□□□□ -0.8
UFD1-202ENST00000399523 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
UFD1-202ENST00000399523 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
UFD1-202ENST00000399523 A0A1B0GVG6 124 aa10.04□□□□□ -0.8
UFD1-202ENST00000399523 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
UFD1-202ENST00000399523 HERVK_113P63121 156 aa10.04□□□□□ -0.8
UFD1-202ENST00000399523 XP32Q5T750 250 aa10.04□□□□□ -0.8
UFD1-202ENST00000399523 GNB1LQ9BYB4 327 aa10.04□□□□□ -0.8
UFD1-202ENST00000399523 F8W036 122 aa10.03□□□□□ -0.8
UFD1-202ENST00000399523 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
UFD1-202ENST00000399523 NPSP0C0P6 89 aa10.02□□□□□ -0.81
UFD1-202ENST00000399523 SEC11AP67812 179 aa10.02□□□□□ -0.81
UFD1-202ENST00000399523 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
UFD1-202ENST00000399523 DAND5Q8N907 189 aa10.02□□□□□ -0.81
UFD1-202ENST00000399523 PRSS47A8MTI9 375 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 SPINK1P00995 79 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 S100A8P05109 93 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 ORMDL3Q8N138 153 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 Q8NBF4 154 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
UFD1-202ENST00000399523 IGIPA6NJ69 53 aa10□□□□□ -0.81
UFD1-202ENST00000399523 KRTAP9-1A8MXZ3 250 aaPredicted RBP10□□□□□ -0.81
UFD1-202ENST00000399523 M0R378 163 aa10□□□□□ -0.81
UFD1-202ENST00000399523 BLOC1S1P78537 153 aa10□□□□□ -0.81
UFD1-202ENST00000399523 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
UFD1-202ENST00000399523 SPRR4Q96PI1 79 aa10□□□□□ -0.81
UFD1-202ENST00000399523 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
UFD1-202ENST00000399523 RAB5BP61020 215 aa9.99□□□□□ -0.81
UFD1-202ENST00000399523 PRELID3AQ96N28 172 aa9.99□□□□□ -0.81
UFD1-202ENST00000399523 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
UFD1-202ENST00000399523 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
UFD1-202ENST00000399523 MRPL54Q6P161 138 aaKnown RBP9.98□□□□□ -0.81
UFD1-202ENST00000399523 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
UFD1-202ENST00000399523 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
UFD1-202ENST00000399523 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
UFD1-202ENST00000399523 HIGD2AQ9BW72 106 aa9.97□□□□□ -0.81
UFD1-202ENST00000399523 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
UFD1-202ENST00000399523 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
UFD1-202ENST00000399523 VPREB1P12018 145 aa9.96□□□□□ -0.82
UFD1-202ENST00000399523 PDZD11Q5EBL8 140 aa9.96□□□□□ -0.82
UFD1-202ENST00000399523 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
UFD1-202ENST00000399523 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
UFD1-202ENST00000399523 Q8N377 158 aa9.93□□□□□ -0.82
UFD1-202ENST00000399523 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
UFD1-202ENST00000399523 Q8N8P6 123 aa9.93□□□□□ -0.82
UFD1-202ENST00000399523 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
UFD1-202ENST00000399523 ZNF706Q9Y5V0 76 aaPredicted RBP9.93□□□□□ -0.82
UFD1-202ENST00000399523 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
UFD1-202ENST00000399523 ADIRFQ15847 76 aa9.92□□□□□ -0.82
UFD1-202ENST00000399523 ORMDL2Q53FV1 153 aa9.92□□□□□ -0.82
UFD1-202ENST00000399523 ALKAL2Q6UX46 152 aa9.92□□□□□ -0.82
UFD1-202ENST00000399523 MAP1LC3AQ9H492 121 aa9.92□□□□□ -0.82
UFD1-202ENST00000399523 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
UFD1-202ENST00000399523 K7EMI3 77 aa9.89□□□□□ -0.83
UFD1-202ENST00000399523 RPL24P83731 157 aaKnown RBP9.89□□□□□ -0.83
UFD1-202ENST00000399523 TIMM17AQ99595 171 aa9.89□□□□□ -0.83
UFD1-202ENST00000399523 TINCRA0A1B0GVN0 87 aa9.88□□□□□ -0.83
UFD1-202ENST00000399523 SLC25A20O43772 301 aa9.88□□□□□ -0.83
UFD1-202ENST00000399523 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
UFD1-202ENST00000399523 SND1-IT1Q9HBX3 110 aa9.88□□□□□ -0.83
UFD1-202ENST00000399523 NAT8Q9UHE5 227 aa9.88□□□□□ -0.83
UFD1-202ENST00000399523 ATP5LO75964 103 aa9.87□□□□□ -0.83
UFD1-202ENST00000399523 PFN2P35080 140 aa9.87□□□□□ -0.83
UFD1-202ENST00000399523 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
UFD1-202ENST00000399523 Q8NDZ9 215 aa9.87□□□□□ -0.83
UFD1-202ENST00000399523 PCOTHQ58A44 107 aa9.86□□□□□ -0.83
UFD1-202ENST00000399523 IGLV8-61A0A075B6I0 122 aa9.85□□□□□ -0.83
UFD1-202ENST00000399523 M0R2T5 61 aa9.84□□□□□ -0.83
UFD1-202ENST00000399523 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
UFD1-202ENST00000399523 RAB14P61106 215 aa9.84□□□□□ -0.83
UFD1-202ENST00000399523 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
UFD1-202ENST00000399523 FLGP20930 4061 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms