RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
HLA-DQB1-203ENST00000399082 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 Q8IZM0 81 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 CARD19Q96LW7 228 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 CAMK2N2Q96S95 79 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
HLA-DQB1-203ENST00000399082 TMEM223A0PJW6 202 aa7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 PANO1I0J062 215 aa7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 SNRPEP62304 92 aaKnown RBP7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TMEM170BQ5T4T1 132 aa7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
HLA-DQB1-203ENST00000399082 HSPG2P98160 4391 aa7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 C5orf52A6NGY3 159 aa7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 H3BRM9 83 aa7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
HLA-DQB1-203ENST00000399082 F8WDY8 70 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 NDUFA1O15239 70 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 S100A6P06703 90 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 XGP55808 180 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 HAMPP81172 84 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 HERC2O95714 4834 aa7.94□□□□□ -1.14
HLA-DQB1-203ENST00000399082 DPM2O94777 84 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 PLNP26678 52 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 KRTDAPP60985 99 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 RNF151Q2KHN1 245 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 KRTAP17-1Q9BYP8 105 aa7.93□□□□□ -1.14
HLA-DQB1-203ENST00000399082 A0A096LNI7 61 aa7.92□□□□□ -1.14
HLA-DQB1-203ENST00000399082 IGKCP01834 107 aa7.92□□□□□ -1.14
HLA-DQB1-203ENST00000399082 PRSS2P07478 247 aa7.92□□□□□ -1.14
HLA-DQB1-203ENST00000399082 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
HLA-DQB1-203ENST00000399082 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TSPEAR-AS2P59090 65 aa7.91□□□□□ -1.14
HLA-DQB1-203ENST00000399082 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
HLA-DQB1-203ENST00000399082 S100A2P29034 98 aa7.9□□□□□ -1.14
HLA-DQB1-203ENST00000399082 CKS1BP61024 79 aa7.9□□□□□ -1.14
HLA-DQB1-203ENST00000399082 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
HLA-DQB1-203ENST00000399082 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
HLA-DQB1-203ENST00000399082 CXCL5P42830 114 aa7.89□□□□□ -1.15
HLA-DQB1-203ENST00000399082 Q6ZRP5 223 aa7.89□□□□□ -1.15
HLA-DQB1-203ENST00000399082 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
HLA-DQB1-203ENST00000399082 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
HLA-DQB1-203ENST00000399082 LOC107984640A0A0U1RRK4 108 aa7.88□□□□□ -1.15
HLA-DQB1-203ENST00000399082 PTTG1IPP53801 180 aa7.88□□□□□ -1.15
HLA-DQB1-203ENST00000399082 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
HLA-DQB1-203ENST00000399082 IGKV2-24A0A0C4DH68 120 aa7.87□□□□□ -1.15
HLA-DQB1-203ENST00000399082 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
HLA-DQB1-203ENST00000399082 A6NJY4 79 aa7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 LEPROTO15243 131 aa7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 ATOH7Q8N100 152 aa7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 STPG4Q8N801 248 aa7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 FAT1Q14517 4588 aa7.86□□□□□ -1.15
HLA-DQB1-203ENST00000399082 A0A087WYN8 130 aa7.85□□□□□ -1.15
HLA-DQB1-203ENST00000399082 E9PLD3 99 aa7.85□□□□□ -1.15
HLA-DQB1-203ENST00000399082 NDUFC2-KCTD14E9PQ53 114 aa7.85□□□□□ -1.15
HLA-DQB1-203ENST00000399082 GAGE2BQ13066 116 aa7.85□□□□□ -1.15
HLA-DQB1-203ENST00000399082 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 C20orf202A1L168 122 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 J3QQQ9 107 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 C9orf129Q5T035 196 aaKnown RBP7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 KRTAP9-9Q9BYP9 154 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 KRTAP9-4Q9BYQ2 154 aa7.84□□□□□ -1.15
HLA-DQB1-203ENST00000399082 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 HERVK_113P61574 105 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 ANKRD39Q53RE8 183 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 KRTAP7-1Q8IUC3 87 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 PLEKHB2Q96CS7 222 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 ERG28Q9UKR5 140 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 PKIGQ9Y2B9 76 aa7.83□□□□□ -1.16
HLA-DQB1-203ENST00000399082 GAGE2EQ4V326 116 aa7.82□□□□□ -1.16
HLA-DQB1-203ENST00000399082 GAGE2DQ9UEU5 116 aa7.82□□□□□ -1.16
HLA-DQB1-203ENST00000399082 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
HLA-DQB1-203ENST00000399082 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
HLA-DQB1-203ENST00000399082 SFTA2Q6UW10 78 aa7.81□□□□□ -1.16
HLA-DQB1-203ENST00000399082 TTTY13Q9BZ97 58 aa7.81□□□□□ -1.16
HLA-DQB1-203ENST00000399082 LINC00474Q9P2X8 69 aa7.81□□□□□ -1.16
HLA-DQB1-203ENST00000399082 PFN2P35080 140 aa7.8□□□□□ -1.16
HLA-DQB1-203ENST00000399082 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
HLA-DQB1-203ENST00000399082 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
HLA-DQB1-203ENST00000399082 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
HLA-DQB1-203ENST00000399082 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
HLA-DQB1-203ENST00000399082 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms