RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
ATL3-201ENST00000398868 A0A1W2PPR1 153 aa6.78□□□□□ -1.32
ATL3-201ENST00000398868 ZNF580Q9UK33 172 aa6.77□□□□□ -1.32
ATL3-201ENST00000398868 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
ATL3-201ENST00000398868 COX6A2Q02221 97 aa6.77□□□□□ -1.33
ATL3-201ENST00000398868 KIR2DL5BQ8NHK3 375 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 A8MTW9 85 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 LINC00959A0A1B0GUT2 108 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 C11orf21Q9P2W6 132 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 Q8N3U1 123 aa6.76□□□□□ -1.33
ATL3-201ENST00000398868 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
ATL3-201ENST00000398868 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
ATL3-201ENST00000398868 P0C879 139 aa6.75□□□□□ -1.33
ATL3-201ENST00000398868 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
ATL3-201ENST00000398868 LINC00310P59036 64 aa6.75□□□□□ -1.33
ATL3-201ENST00000398868 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
ATL3-201ENST00000398868 NTM-AS1Q6ZSK4 140 aa6.74□□□□□ -1.33
ATL3-201ENST00000398868 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
ATL3-201ENST00000398868 CYSRT1A8MQ03 144 aa6.74□□□□□ -1.33
ATL3-201ENST00000398868 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
ATL3-201ENST00000398868 C1orf134Q5TEV5 83 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 Q6ZSR3 168 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 PTPRBP23467 1997 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 ADAMTSL4-AS1Q5T5F5 129 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 LELP1Q5T871 98 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 H0Y9P7 68 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 ABCA12Q86UK0 2595 aa6.73□□□□□ -1.33
ATL3-201ENST00000398868 Q8N814 137 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 M0R378 163 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 IGLV4-60A0A075B6I1 120 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 TRBV6-4A0A1B0GX49 114 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 CRIP3Q6Q6R5 217 aa6.72□□□□□ -1.33
ATL3-201ENST00000398868 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
ATL3-201ENST00000398868 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
ATL3-201ENST00000398868 MYO9AB2RTY4 2548 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 ODF3L2Q3SX64 289 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 CD164L2Q6UWJ8 174 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 PRLHP81277 87 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 MRGPRG-AS1Q2M3A8 158 aa6.7□□□□□ -1.34
ATL3-201ENST00000398868 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
ATL3-201ENST00000398868 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
ATL3-201ENST00000398868 SPTBN4Q9H254 2564 aa6.69□□□□□ -1.34
ATL3-201ENST00000398868 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
ATL3-201ENST00000398868 FSHBP01225 129 aa6.69□□□□□ -1.34
ATL3-201ENST00000398868 EIF4EBP1Q13541 118 aaPredicted RBP6.69□□□□□ -1.34
ATL3-201ENST00000398868 Q6ZSN1 163 aa6.68□□□□□ -1.34
ATL3-201ENST00000398868 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
ATL3-201ENST00000398868 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
ATL3-201ENST00000398868 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
ATL3-201ENST00000398868 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
ATL3-201ENST00000398868 MDFIQ99750 246 aa6.67□□□□□ -1.34
ATL3-201ENST00000398868 Q8N6K4 173 aa6.67□□□□□ -1.34
ATL3-201ENST00000398868 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
ATL3-201ENST00000398868 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 LAMA3Q16787 3333 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 LINC00242Q5T6M2 205 aa6.66□□□□□ -1.34
ATL3-201ENST00000398868 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
ATL3-201ENST00000398868 POLR2KP53803 58 aaKnown RBP6.65□□□□□ -1.34
ATL3-201ENST00000398868 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
ATL3-201ENST00000398868 PIEZO1Q92508 2521 aa6.65□□□□□ -1.35
ATL3-201ENST00000398868 HCG22E2RYF7 251 aa6.65□□□□□ -1.35
ATL3-201ENST00000398868 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.35
ATL3-201ENST00000398868 A0A087WSZ3 146 aa6.64□□□□□ -1.35
ATL3-201ENST00000398868 POLQO75417 2590 aa6.63□□□□□ -1.35
ATL3-201ENST00000398868 BPTFQ12830 3046 aa6.63□□□□□ -1.35
ATL3-201ENST00000398868 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
ATL3-201ENST00000398868 SMIM1B2RUZ4 78 aa6.63□□□□□ -1.35
ATL3-201ENST00000398868 CHD8Q9HCK8 2581 aa6.63□□□□□ -1.35
ATL3-201ENST00000398868 COX17Q14061 63 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 FHL2Q14192 279 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 LINC00574Q9H8X3 128 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 COL27A1Q8IZC6 1860 aaPredicted RBP6.62□□□□□ -1.35
ATL3-201ENST00000398868 CELSR3Q9NYQ7 3312 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 CDH23Q9H251 3354 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 LINC00337Q8N6G1 96 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 Q9BRP9 147 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 PRUNE2Q8WUY3 3088 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 C2orf48Q96LS8 159 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 IGLV1-51P01701 117 aa6.62□□□□□ -1.35
ATL3-201ENST00000398868 FHL3Q13643 280 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 Q8IZM0 81 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 IGKV2D-30A0A075B6S6 120 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 IGKV2-30P06310 120 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 ANKRD11Q6UB99 2663 aaPredicted RBP6.61□□□□□ -1.35
ATL3-201ENST00000398868 VPREB1P12018 145 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
ATL3-201ENST00000398868 MUC22E2RYF6 1773 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms