RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 CSMD3Q7Z407 3707 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 C8orf87E5RJ46 101 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 IGKV2-30P06310 120 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 CKS2P33552 79 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 HERVK_113P63121 156 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 C2orf66Q6UXQ4 117 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 SPATA12Q7Z6I5 190 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 RNASE7Q9H1E1 156 aaKnown RBP2.45□□□□□ -2.02
UBE3A-202ENST00000397954 CDC42SE2Q9NRR3 84 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3OR16-9A0A0B4J2B5 98 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 C1orf195Q5TG92 126 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 Q6ZRU5 148 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 CHCHD1Q96BP2 118 aaKnown RBP2.45□□□□□ -2.02
UBE3A-202ENST00000397954 MRPL35Q9NZE8 188 aaKnown RBP2.45□□□□□ -2.02
UBE3A-202ENST00000397954 CYSLTR1Q9Y271 337 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 UBE2D4Q9Y2X8 147 aa2.45□□□□□ -2.02
UBE3A-202ENST00000397954 STAB2Q8WWQ8 2551 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 NUPR1O60356 82 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 ANGP03950 147 aaKnown RBP2.44□□□□□ -2.02
UBE3A-202ENST00000397954 FGF6P10767 208 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 FABP9Q0Z7S8 132 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 MRPL51Q4U2R6 128 aaKnown RBP2.44□□□□□ -2.02
UBE3A-202ENST00000397954 ENHOQ6UWT2 76 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 LINC00337Q8N6G1 96 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 KRTAP1-5Q9BYS1 174 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 TP73-AS1Q9UF72 201 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 LOC107984640A0A0U1RRK4 108 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 NDUFC2-KCTD14E9PQ53 114 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 COX17Q14061 63 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 AMELXQ99217 191 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 PLAC8Q9NZF1 115 aa2.44□□□□□ -2.02
UBE3A-202ENST00000397954 IGLV2-18A0A075B6J9 118 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 TMSB15BA0A087X1C1 80 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 KRTAP4-16G5E9R7 235 aaPredicted RBP2.43□□□□□ -2.02
UBE3A-202ENST00000397954 COX7A2LO14548 114 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 IFITM2Q01629 132 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 MPV17L2Q567V2 206 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 PRELID3AQ96N28 172 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 IGKV2D-24A0A075B6R9 120 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 LINC00959A0A1B0GUT2 108 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 TMEM262E9PQX1 116 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 H3BRM9 83 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 RPS10P46783 165 aaKnown RBP2.43□□□□□ -2.02
UBE3A-202ENST00000397954 Q6ZQT7 251 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 Q8IZM0 81 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 TENM3Q9P273 2699 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 TRAV12-1A0A0B4J245 112 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 C7orf33Q8WU49 177 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 UBE2WQ96B02 151 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 KLK12Q9UKR0 248 aa2.43□□□□□ -2.02
UBE3A-202ENST00000397954 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 KRTAP29-1A8MX34 341 aaPredicted RBP2.42□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3-33P01772 117 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 PRM2P04554 102 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3-30-3P0DP02 117 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 SPACA4Q8TDM5 124 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 NBEAL2Q6ZNJ1 2754 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 PKD1P98161 4303 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 NDUFA1O15239 70 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 CARD19Q96LW7 228 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 CHAC1Q9BUX1 264 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 SMCO4Q9NRQ5 59 aa2.42□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV6-1A0A0B4J1U7 121 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 IGHV3-73A0A0B4J1V6 119 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 A0A1B0GV50 99 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 IFITM10A6NMD0 228 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 D6R8Y8 96 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 M0R2N4 97 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 PSPHP1O15172 72 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 NMUP48645 174 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 CEND1Q8N111 149 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 LINC00269Q8N2A0 174 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
UBE3A-202ENST00000397954 TRAV26-2A0A0B4J265 109 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 IGLC3P0DOY3 106 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 UBE2D1P51668 147 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 COPS9Q8WXC6 57 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
UBE3A-202ENST00000397954 IGIPA6NJ69 53 aa2.4□□□□□ -2.02
UBE3A-202ENST00000397954 SYCNQ0VAF6 134 aa2.4□□□□□ -2.02
UBE3A-202ENST00000397954 C15orf56Q8N910 161 aa2.4□□□□□ -2.02
UBE3A-202ENST00000397954 HBDP02042 147 aa2.4□□□□□ -2.03
UBE3A-202ENST00000397954 JOSD1Q15040 202 aaPredicted RBP2.4□□□□□ -2.03
UBE3A-202ENST00000397954 COA6Q5JTJ3 125 aaKnown RBP2.4□□□□□ -2.03
UBE3A-202ENST00000397954 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.03
UBE3A-202ENST00000397954 SDIM1Q6ZPB5 146 aa2.4□□□□□ -2.03
UBE3A-202ENST00000397954 RPL39LQ96EH5 51 aaKnown RBP2.4□□□□□ -2.03
UBE3A-202ENST00000397954 RYR3Q15413 4870 aa2.4□□□□□ -2.03
UBE3A-202ENST00000397954 LOC389332A0A1B0GUA5 103 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms