RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
CUX2-202ENST00000397643 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
CUX2-202ENST00000397643 FOXI1Q12951 378 aa10.04□□□□□ -0.8
CUX2-202ENST00000397643 LINC00242Q5T6M2 205 aa10.04□□□□□ -0.8
CUX2-202ENST00000397643 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
CUX2-202ENST00000397643 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
CUX2-202ENST00000397643 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
CUX2-202ENST00000397643 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
CUX2-202ENST00000397643 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
CUX2-202ENST00000397643 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
CUX2-202ENST00000397643 COX7A2LO14548 114 aa10.02□□□□□ -0.81
CUX2-202ENST00000397643 HERVK_113P63121 156 aa10.02□□□□□ -0.81
CUX2-202ENST00000397643 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
CUX2-202ENST00000397643 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
CUX2-202ENST00000397643 C5orf52A6NGY3 159 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 H0Y8G0 127 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 MALP21145 153 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 STPG4Q8N801 248 aa10.01□□□□□ -0.81
CUX2-202ENST00000397643 TMA7Q9Y2S6 64 aaKnown RBP10.01□□□□□ -0.81
CUX2-202ENST00000397643 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
CUX2-202ENST00000397643 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
CUX2-202ENST00000397643 C5orf38Q86SI9 138 aa10□□□□□ -0.81
CUX2-202ENST00000397643 A0A096LNI7 61 aa9.99□□□□□ -0.81
CUX2-202ENST00000397643 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
CUX2-202ENST00000397643 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
CUX2-202ENST00000397643 REG3GQ6UW15 175 aa9.99□□□□□ -0.81
CUX2-202ENST00000397643 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
CUX2-202ENST00000397643 F8VRH5 84 aa9.98□□□□□ -0.81
CUX2-202ENST00000397643 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
CUX2-202ENST00000397643 APOMO95445 188 aa9.98□□□□□ -0.81
CUX2-202ENST00000397643 LINC01561Q8N1V8 128 aa9.98□□□□□ -0.81
CUX2-202ENST00000397643 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
CUX2-202ENST00000397643 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
CUX2-202ENST00000397643 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
CUX2-202ENST00000397643 A0A087WZ39 114 aa9.97□□□□□ -0.81
CUX2-202ENST00000397643 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
CUX2-202ENST00000397643 KRTDAPP60985 99 aa9.97□□□□□ -0.81
CUX2-202ENST00000397643 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
CUX2-202ENST00000397643 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.82
CUX2-202ENST00000397643 H3BRM9 83 aa9.96□□□□□ -0.82
CUX2-202ENST00000397643 C3orf79P0CE67 100 aa9.96□□□□□ -0.82
CUX2-202ENST00000397643 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
CUX2-202ENST00000397643 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
CUX2-202ENST00000397643 C11orf86A6NJI1 115 aa9.95□□□□□ -0.82
CUX2-202ENST00000397643 PLNP26678 52 aa9.95□□□□□ -0.82
CUX2-202ENST00000397643 MUC2Q02817 5179 aa9.94□□□□□ -0.82
CUX2-202ENST00000397643 C20orf202A1L168 122 aa9.94□□□□□ -0.82
CUX2-202ENST00000397643 DPM2O94777 84 aa9.94□□□□□ -0.82
CUX2-202ENST00000397643 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
CUX2-202ENST00000397643 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
CUX2-202ENST00000397643 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
CUX2-202ENST00000397643 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
CUX2-202ENST00000397643 ORAOV1Q8WV07 137 aa9.93□□□□□ -0.82
CUX2-202ENST00000397643 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
CUX2-202ENST00000397643 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
CUX2-202ENST00000397643 IGKCP01834 107 aa9.92□□□□□ -0.82
CUX2-202ENST00000397643 Q6ZRP5 223 aa9.92□□□□□ -0.82
CUX2-202ENST00000397643 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
CUX2-202ENST00000397643 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
CUX2-202ENST00000397643 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
CUX2-202ENST00000397643 PRSS2P07478 247 aa9.9□□□□□ -0.82
CUX2-202ENST00000397643 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
CUX2-202ENST00000397643 AKR1D1P51857 326 aa9.9□□□□□ -0.82
CUX2-202ENST00000397643 HERVK_113P61574 105 aa9.88□□□□□ -0.83
CUX2-202ENST00000397643 C2orf48Q96LS8 159 aa9.88□□□□□ -0.83
CUX2-202ENST00000397643 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
CUX2-202ENST00000397643 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
CUX2-202ENST00000397643 F8WDY8 70 aa9.87□□□□□ -0.83
CUX2-202ENST00000397643 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
CUX2-202ENST00000397643 Q8IZM0 81 aa9.87□□□□□ -0.83
CUX2-202ENST00000397643 LINC00526Q96FQ7 95 aa9.87□□□□□ -0.83
CUX2-202ENST00000397643 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
CUX2-202ENST00000397643 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
CUX2-202ENST00000397643 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
CUX2-202ENST00000397643 CARD19Q96LW7 228 aa9.86□□□□□ -0.83
CUX2-202ENST00000397643 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
CUX2-202ENST00000397643 CKS1BP61024 79 aa9.85□□□□□ -0.83
CUX2-202ENST00000397643 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
CUX2-202ENST00000397643 KRTAP9-2Q9BYQ4 174 aa9.85□□□□□ -0.83
CUX2-202ENST00000397643 PKIGQ9Y2B9 76 aa9.85□□□□□ -0.83
CUX2-202ENST00000397643 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
CUX2-202ENST00000397643 NDUFA1O15239 70 aa9.83□□□□□ -0.84
CUX2-202ENST00000397643 CXCL5P42830 114 aa9.83□□□□□ -0.84
CUX2-202ENST00000397643 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
CUX2-202ENST00000397643 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
CUX2-202ENST00000397643 PLEKHB2Q96CS7 222 aa9.82□□□□□ -0.84
CUX2-202ENST00000397643 LEPROTO15243 131 aa9.81□□□□□ -0.84
CUX2-202ENST00000397643 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
CUX2-202ENST00000397643 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
CUX2-202ENST00000397643 PSORS1C2Q9UIG4 136 aa9.81□□□□□ -0.84
CUX2-202ENST00000397643 E9PLD3 99 aa9.8□□□□□ -0.84
CUX2-202ENST00000397643 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
CUX2-202ENST00000397643 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
CUX2-202ENST00000397643 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
CUX2-202ENST00000397643 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
CUX2-202ENST00000397643 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
CUX2-202ENST00000397643 HSBP1L1C9JCN9 74 aa9.78□□□□□ -0.84
CUX2-202ENST00000397643 J3QQQ9 107 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms