RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
CCDC40-204ENST00000397545 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
CCDC40-204ENST00000397545 FAM110AQ9BQ89 295 aa7.82□□□□□ -1.16
CCDC40-204ENST00000397545 A0A096LNI7 61 aa7.81□□□□□ -1.16
CCDC40-204ENST00000397545 IGKV2-24A0A0C4DH68 120 aa7.81□□□□□ -1.16
CCDC40-204ENST00000397545 TRBV6-4A0A1B0GX49 114 aa7.81□□□□□ -1.16
CCDC40-204ENST00000397545 COX8CQ7Z4L0 72 aa7.81□□□□□ -1.16
CCDC40-204ENST00000397545 CELSR1Q9NYQ6 3014 aa7.81□□□□□ -1.16
CCDC40-204ENST00000397545 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 UBE2D3P61077 147 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 UBE2D2P62837 147 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 WFDC9Q8NEX5 89 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 STAB1Q9NY15 2570 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 Q6ZQY7 126 aa7.8□□□□□ -1.16
CCDC40-204ENST00000397545 TIMM17BO60830 172 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 COX6A2Q02221 97 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 BPY2O14599 106 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 LY6G6DO95868 133 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 LINC01006Q8NI28 216 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 HIGD2AQ9BW72 106 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 USP17L23D6RBM5 183 aa7.79□□□□□ -1.16
CCDC40-204ENST00000397545 LINC00959A0A1B0GUT2 108 aa7.78□□□□□ -1.16
CCDC40-204ENST00000397545 Q6ZSN1 163 aa7.78□□□□□ -1.16
CCDC40-204ENST00000397545 CRYBG3Q68DQ2 2970 aa7.78□□□□□ -1.16
CCDC40-204ENST00000397545 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
CCDC40-204ENST00000397545 SMIM1B2RUZ4 78 aa7.77□□□□□ -1.17
CCDC40-204ENST00000397545 TEX15Q9BXT5 2789 aa7.77□□□□□ -1.17
CCDC40-204ENST00000397545 UTP20O75691 2785 aaKnown RBP7.77□□□□□ -1.17
CCDC40-204ENST00000397545 C3orf84H3BNL1 204 aa7.76□□□□□ -1.17
CCDC40-204ENST00000397545 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
CCDC40-204ENST00000397545 A0A087WVE0 104 aa7.76□□□□□ -1.17
CCDC40-204ENST00000397545 PDE6GP18545 87 aa7.76□□□□□ -1.17
CCDC40-204ENST00000397545 C9orf116Q5BN46 136 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-204ENST00000397545 C1orf158Q8N1D5 194 aa7.76□□□□□ -1.17
CCDC40-204ENST00000397545 MP68P56378 58 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 IGLV4-60A0A075B6I1 120 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 CCKP06307 115 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
CCDC40-204ENST00000397545 LYRM9A8MSI8 78 aa7.74□□□□□ -1.17
CCDC40-204ENST00000397545 UBE2AP49459 152 aa7.74□□□□□ -1.17
CCDC40-204ENST00000397545 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
CCDC40-204ENST00000397545 C11orf45Q8TAV5 145 aa7.73□□□□□ -1.17
CCDC40-204ENST00000397545 COL6A5A8TX70 2615 aa7.73□□□□□ -1.17
CCDC40-204ENST00000397545 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
CCDC40-204ENST00000397545 SERP2Q8N6R1 65 aa7.73□□□□□ -1.17
CCDC40-204ENST00000397545 KIF25-AS1Q9Y6Z4 181 aa7.73□□□□□ -1.17
CCDC40-204ENST00000397545 UNQ6190/PRO20217Q6UXQ8 127 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 AMELXQ99217 191 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 IMUPQ9GZP8 106 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 VPS13CQ709C8 3753 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 DEFB131BA0A096LNP1 70 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 Q9UF83 564 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 H0Y9J4 135 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 COX7CP15954 63 aa7.72□□□□□ -1.17
CCDC40-204ENST00000397545 H3BQ85 93 aa7.71□□□□□ -1.17
CCDC40-204ENST00000397545 CDIP1Q9H305 208 aa7.71□□□□□ -1.17
CCDC40-204ENST00000397545 NDUFB1O75438 58 aa7.71□□□□□ -1.18
CCDC40-204ENST00000397545 LRRC75A-AS1Q8N1F1 130 aa7.71□□□□□ -1.18
CCDC40-204ENST00000397545 A0A087WYN8 130 aa7.7□□□□□ -1.18
CCDC40-204ENST00000397545 SMCPP49901 116 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-204ENST00000397545 PRR4Q16378 134 aa7.7□□□□□ -1.18
CCDC40-204ENST00000397545 ZFHX3Q15911 3703 aa7.7□□□□□ -1.18
CCDC40-204ENST00000397545 CYSRT1A8MQ03 144 aa7.7□□□□□ -1.18
CCDC40-204ENST00000397545 UNC79Q9P2D8 2635 aa7.7□□□□□ -1.18
CCDC40-204ENST00000397545 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-204ENST00000397545 SYCNQ0VAF6 134 aa7.69□□□□□ -1.18
CCDC40-204ENST00000397545 KLK5Q9Y337 293 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-204ENST00000397545 ZANQ9Y493 2812 aa7.69□□□□□ -1.18
CCDC40-204ENST00000397545 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-204ENST00000397545 LINC00315P59091 139 aa7.69□□□□□ -1.18
CCDC40-204ENST00000397545 NBEAL1Q6ZS30 2694 aa7.69□□□□□ -1.18
CCDC40-204ENST00000397545 CELSR2Q9HCU4 2923 aa7.68□□□□□ -1.18
CCDC40-204ENST00000397545 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
CCDC40-204ENST00000397545 KPRPQ5T749 579 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-204ENST00000397545 ATP5EP2Q5VTU8 51 aa7.68□□□□□ -1.18
CCDC40-204ENST00000397545 MIFP14174 115 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 RPL37AP8A6NKH3 93 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 A8MTW9 85 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 FAM19A1Q7Z5A9 133 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
CCDC40-204ENST00000397545 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 CSMD2Q7Z408 3487 aa7.67□□□□□ -1.18
CCDC40-204ENST00000397545 Q8IZM0 81 aa7.66□□□□□ -1.18
CCDC40-204ENST00000397545 A0A087WZ39 114 aa7.66□□□□□ -1.18
CCDC40-204ENST00000397545 Q6Q795 121 aa7.66□□□□□ -1.18
CCDC40-204ENST00000397545 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
CCDC40-204ENST00000397545 PPDPFQ9H3Y8 114 aa7.66□□□□□ -1.18
CCDC40-204ENST00000397545 WFDC10BQ8IUB3 73 aa7.65□□□□□ -1.18
CCDC40-204ENST00000397545 Q8N2B8 174 aa7.65□□□□□ -1.18
CCDC40-204ENST00000397545 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms