RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 LOC389332A0A1B0GUA5 103 aa7□□□□□ -1.29
SYNE4-203ENST00000397428 BCE1O60756 84 aa7□□□□□ -1.29
SYNE4-203ENST00000397428 Q8N8P6 123 aa7□□□□□ -1.29
SYNE4-203ENST00000397428 C2orf88Q9BSF0 95 aa7□□□□□ -1.29
SYNE4-203ENST00000397428 ALKBH7Q9BT30 221 aaPredicted RBP7□□□□□ -1.29
SYNE4-203ENST00000397428 LAMTOR2Q9Y2Q5 125 aa7□□□□□ -1.29
SYNE4-203ENST00000397428 CRYGAP11844 174 aa6.99□□□□□ -1.29
SYNE4-203ENST00000397428 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
SYNE4-203ENST00000397428 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
SYNE4-203ENST00000397428 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
SYNE4-203ENST00000397428 CYSLTR1Q9Y271 337 aa6.99□□□□□ -1.29
SYNE4-203ENST00000397428 F8VRH5 84 aa6.98□□□□□ -1.29
SYNE4-203ENST00000397428 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
SYNE4-203ENST00000397428 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
SYNE4-203ENST00000397428 MAP1LC3AQ9H492 121 aa6.98□□□□□ -1.29
SYNE4-203ENST00000397428 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
SYNE4-203ENST00000397428 hCG_2014768A0A024R1R8 64 aa6.97□□□□□ -1.29
SYNE4-203ENST00000397428 K7EMI3 77 aa6.97□□□□□ -1.29
SYNE4-203ENST00000397428 SEC11AP67812 179 aa6.97□□□□□ -1.29
SYNE4-203ENST00000397428 HERVK_113P63121 156 aa6.96□□□□□ -1.3
SYNE4-203ENST00000397428 ORMDL2Q53FV1 153 aa6.96□□□□□ -1.3
SYNE4-203ENST00000397428 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
SYNE4-203ENST00000397428 RPL37AP8A6NKH3 93 aa6.95□□□□□ -1.3
SYNE4-203ENST00000397428 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
SYNE4-203ENST00000397428 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
SYNE4-203ENST00000397428 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
SYNE4-203ENST00000397428 FAM229BQ4G0N7 80 aa6.94□□□□□ -1.3
SYNE4-203ENST00000397428 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
SYNE4-203ENST00000397428 G0S2P27469 103 aa6.93□□□□□ -1.3
SYNE4-203ENST00000397428 CXCL5P42830 114 aa6.93□□□□□ -1.3
SYNE4-203ENST00000397428 CTAG1AP78358 180 aa6.93□□□□□ -1.3
SYNE4-203ENST00000397428 GEMIN7Q9H840 131 aaKnown RBP6.93□□□□□ -1.3
SYNE4-203ENST00000397428 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
SYNE4-203ENST00000397428 PDZD11Q5EBL8 140 aa6.92□□□□□ -1.3
SYNE4-203ENST00000397428 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
SYNE4-203ENST00000397428 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
SYNE4-203ENST00000397428 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
SYNE4-203ENST00000397428 ERASQ7Z444 233 aa6.91□□□□□ -1.3
SYNE4-203ENST00000397428 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 GAGE10A6NGK3 116 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 COX7B2Q8TF08 81 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
SYNE4-203ENST00000397428 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
SYNE4-203ENST00000397428 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
SYNE4-203ENST00000397428 MT-ND4LP03901 98 aa6.89□□□□□ -1.31
SYNE4-203ENST00000397428 PNRC1Q12796 327 aaPredicted RBP6.89□□□□□ -1.31
SYNE4-203ENST00000397428 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
SYNE4-203ENST00000397428 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 UBE2AP49459 152 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 RAB5BP61020 215 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
SYNE4-203ENST00000397428 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
SYNE4-203ENST00000397428 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
SYNE4-203ENST00000397428 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
SYNE4-203ENST00000397428 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
SYNE4-203ENST00000397428 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
SYNE4-203ENST00000397428 LINC01549A6NIU2 74 aa6.85□□□□□ -1.31
SYNE4-203ENST00000397428 SCO1O75880 301 aa6.85□□□□□ -1.31
SYNE4-203ENST00000397428 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
SYNE4-203ENST00000397428 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
SYNE4-203ENST00000397428 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
SYNE4-203ENST00000397428 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.31
SYNE4-203ENST00000397428 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
SYNE4-203ENST00000397428 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
SYNE4-203ENST00000397428 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
SYNE4-203ENST00000397428 VPREB1P12018 145 aa6.83□□□□□ -1.32
SYNE4-203ENST00000397428 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
SYNE4-203ENST00000397428 PMVKQ15126 192 aa6.83□□□□□ -1.32
SYNE4-203ENST00000397428 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
SYNE4-203ENST00000397428 TMEM238C9JI98 176 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 M0R378 163 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 ATP5LO75964 103 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 PRLHP81277 87 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
SYNE4-203ENST00000397428 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
SYNE4-203ENST00000397428 PFN2P35080 140 aa6.81□□□□□ -1.32
SYNE4-203ENST00000397428 GNB1LQ9BYB4 327 aa6.81□□□□□ -1.32
SYNE4-203ENST00000397428 RPL24P83731 157 aaKnown RBP6.8□□□□□ -1.32
SYNE4-203ENST00000397428 COX17Q14061 63 aa6.8□□□□□ -1.32
SYNE4-203ENST00000397428 C3orf22Q8N5N4 141 aa6.8□□□□□ -1.32
SYNE4-203ENST00000397428 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
SYNE4-203ENST00000397428 H3BRM9 83 aa6.79□□□□□ -1.32
SYNE4-203ENST00000397428 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
SYNE4-203ENST00000397428 Q8NDZ9 215 aa6.79□□□□□ -1.32
SYNE4-203ENST00000397428 IGLC3P0DOY3 106 aa6.78□□□□□ -1.32
SYNE4-203ENST00000397428 FP248Q71RG6 208 aaPredicted RBP6.78□□□□□ -1.32
SYNE4-203ENST00000397428 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
SYNE4-203ENST00000397428 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
SYNE4-203ENST00000397428 RAB14P61106 215 aa6.77□□□□□ -1.33
SYNE4-203ENST00000397428 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
SYNE4-203ENST00000397428 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
SYNE4-203ENST00000397428 SPRR4Q96PI1 79 aa6.76□□□□□ -1.33
SYNE4-203ENST00000397428 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms