RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CKS1BP61024 79 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 HSD52Q0P140 79 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 CIRBPQ14011 172 aaKnown RBP9□□□□□ -0.97
MCF2L-209ENST00000397036 C15orf56Q8N910 161 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
MCF2L-209ENST00000397036 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 TMEM238C9JI98 176 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 LITAFQ99732 161 aa9□□□□□ -0.97
MCF2L-209ENST00000397036 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
MCF2L-209ENST00000397036 PTTG1IPP53801 180 aa8.99□□□□□ -0.97
MCF2L-209ENST00000397036 LYSTQ99698 3801 aa8.98□□□□□ -0.97
MCF2L-209ENST00000397036 M0R143 59 aa8.98□□□□□ -0.97
MCF2L-209ENST00000397036 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
MCF2L-209ENST00000397036 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
MCF2L-209ENST00000397036 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
MCF2L-209ENST00000397036 COX17Q14061 63 aa8.97□□□□□ -0.97
MCF2L-209ENST00000397036 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
MCF2L-209ENST00000397036 USP17L23D6RBM5 183 aa8.96□□□□□ -0.97
MCF2L-209ENST00000397036 LY6G6CO95867 125 aa8.96□□□□□ -0.97
MCF2L-209ENST00000397036 IFITM1P13164 125 aa8.96□□□□□ -0.97
MCF2L-209ENST00000397036 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.97
MCF2L-209ENST00000397036 C2orf82Q6UX34 121 aa8.96□□□□□ -0.97
MCF2L-209ENST00000397036 Q6ZRN7 208 aaPredicted RBP8.96□□□□□ -0.97
MCF2L-209ENST00000397036 HIST1H4GQ99525 98 aa8.96□□□□□ -0.97
MCF2L-209ENST00000397036 TRBV30A0A0K0K1B3 111 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 CEND1Q8N111 149 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 PSCAO43653 123 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 GCSHP23434 173 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 RNF151Q2KHN1 245 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 MEIG1Q5JSS6 88 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 UNQ6190/PRO20217Q6UXQ8 127 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 C6orf223Q8N319 242 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
MCF2L-209ENST00000397036 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
MCF2L-209ENST00000397036 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
MCF2L-209ENST00000397036 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
MCF2L-209ENST00000397036 HINT1P49773 126 aaPredicted RBP8.93□□□□□ -0.98
MCF2L-209ENST00000397036 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
MCF2L-209ENST00000397036 LOC107984156A0A0G2JMH3 177 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 M0R2N4 97 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 ARL17AQ8IVW1 177 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 LINC00526Q96FQ7 95 aa8.92□□□□□ -0.98
MCF2L-209ENST00000397036 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
MCF2L-209ENST00000397036 LINC00158P58513 81 aa8.91□□□□□ -0.98
MCF2L-209ENST00000397036 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
MCF2L-209ENST00000397036 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 A6NJY4 79 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
MCF2L-209ENST00000397036 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
MCF2L-209ENST00000397036 C1orf134Q5TEV5 83 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 Q6ZRU5 148 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 MUSTN1Q8IVN3 82 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 KMT2AQ03164 3969 aa8.9□□□□□ -0.98
MCF2L-209ENST00000397036 FXYD2P54710 66 aa8.9□□□□□ -0.99
MCF2L-209ENST00000397036 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.99
MCF2L-209ENST00000397036 MIR7-3HGQ8N6C7 128 aa8.9□□□□□ -0.99
MCF2L-209ENST00000397036 LINC00308Q8TCZ7 52 aa8.9□□□□□ -0.99
MCF2L-209ENST00000397036 SLPIP03973 132 aa8.89□□□□□ -0.99
MCF2L-209ENST00000397036 PFN2P35080 140 aa8.89□□□□□ -0.99
MCF2L-209ENST00000397036 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
MCF2L-209ENST00000397036 A6NDN8 102 aa8.88□□□□□ -0.99
MCF2L-209ENST00000397036 TLX1NBP0CAT3 122 aa8.88□□□□□ -0.99
MCF2L-209ENST00000397036 WFDC2Q14508 124 aa8.88□□□□□ -0.99
MCF2L-209ENST00000397036 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
MCF2L-209ENST00000397036 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
MCF2L-209ENST00000397036 EREGO14944 169 aa8.87□□□□□ -0.99
MCF2L-209ENST00000397036 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-209ENST00000397036 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
MCF2L-209ENST00000397036 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
MCF2L-209ENST00000397036 LECT2O14960 151 aa8.86□□□□□ -0.99
MCF2L-209ENST00000397036 COL5A1-AS1Q5SY13 56 aa8.86□□□□□ -0.99
MCF2L-209ENST00000397036 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
MCF2L-209ENST00000397036 DAND5Q8N907 189 aa8.86□□□□□ -0.99
MCF2L-209ENST00000397036 A4D1N5 150 aa8.85□□□□□ -0.99
MCF2L-209ENST00000397036 BATFQ16520 125 aa8.85□□□□□ -0.99
MCF2L-209ENST00000397036 A0A087WTM6 91 aa8.85□□□□□ -0.99
MCF2L-209ENST00000397036 LCE6AA0A183 80 aa8.85□□□□□ -0.99
MCF2L-209ENST00000397036 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-209ENST00000397036 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
MCF2L-209ENST00000397036 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
MCF2L-209ENST00000397036 DNAH2Q9P225 4427 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 A0A0B4J2C4 111 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 NDUFC2O95298 119 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 CFC1BP0CG36 223 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 CFC1P0CG37 223 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 Q8N814 137 aa8.83□□□□□ -1
MCF2L-209ENST00000397036 NHP2Q9NX24 153 aaKnown RBP8.83□□□□□ -1
MCF2L-209ENST00000397036 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
MCF2L-209ENST00000397036 LOC107984640A0A0U1RRK4 108 aa8.8□□□□□ -1
MCF2L-209ENST00000397036 NPC2P61916 151 aa8.8□□□□□ -1
MCF2L-209ENST00000397036 Q6ZRP5 223 aa8.8□□□□□ -1
MCF2L-209ENST00000397036 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
MCF2L-209ENST00000397036 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms