RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CDC42SE2Q9NRR3 84 aa2.82□□□□□ -1.96
HERC4-204ENST00000395198 CEP192Q8TEP8 1941 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 SETXQ7Z333 2677 aaKnown RBP2.81□□□□□ -1.96
HERC4-204ENST00000395198 CTXND1A0A1B0GTU2 59 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 A8MUU9 505 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 CHKB-CPT1BH3BT56 60 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 FSHBP01225 129 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 ATXN8Q156A1 80 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 ATRQ13535 2644 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 PRRC2CQ9Y520 2896 aaKnown RBP2.81□□□□□ -1.96
HERC4-204ENST00000395198 CELSR3Q9NYQ7 3312 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 TRGV2A0A075B6R0 118 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 ZNRD1Q9P1U0 126 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 CSMD1Q96PZ7 3565 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 IGLV5-39A0A0G2JS06 123 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 CLPSL1A2RUU4 121 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 USP24Q9UPU5 2620 aa2.81□□□□□ -1.96
HERC4-204ENST00000395198 PSCAO43653 123 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 SH2D1AO60880 128 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 MGAM2Q2M2H8 2515 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 CUBNO60494 3623 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 TNRC6BQ9UPQ9 1833 aaKnown RBP2.8□□□□□ -1.96
HERC4-204ENST00000395198 IGKV1D-37A0A075B6S9 117 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 SERF2P84101 59 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 Q6ZR54 194 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 V9GYV3 84 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 IGKV1OR2-108A0A075B7D4 117 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 TRBV7-4A0A0J9YYF1 115 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 G3V318 75 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 RTL8CO15255 209 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 FCER1GP30273 86 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 RNF5Q99942 180 aa2.8□□□□□ -1.96
HERC4-204ENST00000395198 HELZ2Q9BYK8 2649 aaKnown RBP2.8□□□□□ -1.96
HERC4-204ENST00000395198 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 USMG5Q96IX5 58 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 NDPQ00604 133 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 Q8NBF4 154 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 J3QRE1 110 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 PRCDQ00LT1 54 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 LCE2CQ5TA81 110 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 KAAG1Q9UBP8 84 aa2.79□□□□□ -1.96
HERC4-204ENST00000395198 MIR22HGQ0VDD5 57 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 LRCOL1A6NCL2 159 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 ARL14EPLP0DKL9 152 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 Q8NAQ8 132 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 RPL36ALQ969Q0 106 aaKnown RBP2.78□□□□□ -1.96
HERC4-204ENST00000395198 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 RHPN1-AS1Q9BWJ2 59 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 ANKRD17O75179 2603 aaKnown RBP2.78□□□□□ -1.96
HERC4-204ENST00000395198 IGKV3D-7A0A0C4DH55 119 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 A6NDX4 124 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 CFC1P0CG37 223 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 CSAG1Q6PB30 78 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 Q8N9W7 124 aa2.78□□□□□ -1.96
HERC4-204ENST00000395198 A0A096LNJ9 63 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 TRGV4A0A0C4DH28 118 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 DEFB131AP59861 70 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 CENPEQ02224 2701 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 SMIM27A0A1W2PRY6 76 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 SUMO4Q6EEV6 95 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 MUC7Q8TAX7 377 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 TRAV23DV6A0A075B6W5 121 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 SMIM1B2RUZ4 78 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 DNAH10OSP0CZ25 163 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 TFF3Q07654 80 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 DEFB136Q30KP8 78 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 LAMA1P25391 3075 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 ZNF815PA8K554 130 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 Q8TAT8 98 aa2.77□□□□□ -1.97
HERC4-204ENST00000395198 IGHV3-73A0A0B4J1V6 119 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 KIF25-AS1Q9Y6Z4 181 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 TRBV6-6A0A0A6YYG2 114 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 LOC101927531A0A1B0GV80 90 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 DEFB130BP0DP73 79 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 DEFB130AP0DP74 79 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 C2orf66Q6UXQ4 117 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 TXNDC17Q9BRA2 123 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 CR1P17927 2039 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 A0A1W2PNM2 257 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 PMS2P5A8MQ11 134 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 ARMS2P0C7Q2 107 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 KRTAP10-9P60411 292 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 CHCHD7Q9BUK0 85 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 TRIOO75962 3097 aa2.76□□□□□ -1.97
HERC4-204ENST00000395198 BPY2O14599 106 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 BOD1L1Q8NFC6 3051 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 TEP1Q99973 2627 aaKnown RBP2.75□□□□□ -1.97
HERC4-204ENST00000395198 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 LIMD2Q9BT23 127 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 CFAP46Q8IYW2 2715 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 TRGV1A0A0A0MS02 117 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 ERC2-IT1O76042 136 aa2.75□□□□□ -1.97
HERC4-204ENST00000395198 IGHV3-53P01767 116 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms