RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
TRAF4-203ENST00000394925 RETNLBQ9BQ08 111 aa12.35□□□□□ -0.43
TRAF4-203ENST00000394925 hCG_2014768A0A024R1R8 64 aa12.34□□□□□ -0.43
TRAF4-203ENST00000394925 RPL37AP8A6NKH3 93 aa12.34□□□□□ -0.43
TRAF4-203ENST00000394925 PRSS47A8MTI9 375 aa12.34□□□□□ -0.43
TRAF4-203ENST00000394925 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
TRAF4-203ENST00000394925 KRTAP9-6A0A140TA67 174 aa12.33□□□□□ -0.44
TRAF4-203ENST00000394925 F8VRH5 84 aa12.33□□□□□ -0.44
TRAF4-203ENST00000394925 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
TRAF4-203ENST00000394925 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
TRAF4-203ENST00000394925 PEA15Q15121 130 aa12.32□□□□□ -0.44
TRAF4-203ENST00000394925 KRTAP13-2Q52LG2 175 aa12.32□□□□□ -0.44
TRAF4-203ENST00000394925 FAM19A3Q7Z5A8 133 aa12.32□□□□□ -0.44
TRAF4-203ENST00000394925 Q8N8P6 123 aa12.32□□□□□ -0.44
TRAF4-203ENST00000394925 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
TRAF4-203ENST00000394925 LAMTOR2Q9Y2Q5 125 aa12.31□□□□□ -0.44
TRAF4-203ENST00000394925 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
TRAF4-203ENST00000394925 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
TRAF4-203ENST00000394925 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
TRAF4-203ENST00000394925 HERVK_113P63121 156 aa12.29□□□□□ -0.44
TRAF4-203ENST00000394925 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
TRAF4-203ENST00000394925 NPSP0C0P6 89 aa12.28□□□□□ -0.44
TRAF4-203ENST00000394925 SEC11AP67812 179 aa12.28□□□□□ -0.44
TRAF4-203ENST00000394925 ORMDL2Q53FV1 153 aa12.28□□□□□ -0.44
TRAF4-203ENST00000394925 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
TRAF4-203ENST00000394925 CXCL5P42830 114 aa12.27□□□□□ -0.45
TRAF4-203ENST00000394925 UBE2AP49459 152 aa12.27□□□□□ -0.45
TRAF4-203ENST00000394925 LINC00304Q8N9R0 145 aa12.27□□□□□ -0.45
TRAF4-203ENST00000394925 KRTAP13-1Q8IUC0 172 aa12.25□□□□□ -0.45
TRAF4-203ENST00000394925 TPRXLQ17RH7 258 aa12.24□□□□□ -0.45
TRAF4-203ENST00000394925 FAM229BQ4G0N7 80 aa12.24□□□□□ -0.45
TRAF4-203ENST00000394925 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
TRAF4-203ENST00000394925 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
TRAF4-203ENST00000394925 K7EMI3 77 aa12.22□□□□□ -0.45
TRAF4-203ENST00000394925 NKAPP1Q8N9T2 125 aa12.22□□□□□ -0.45
TRAF4-203ENST00000394925 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
TRAF4-203ENST00000394925 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
TRAF4-203ENST00000394925 RAB5BP61020 215 aa12.21□□□□□ -0.45
TRAF4-203ENST00000394925 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-203ENST00000394925 COX7B2Q8TF08 81 aa12.21□□□□□ -0.45
TRAF4-203ENST00000394925 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
TRAF4-203ENST00000394925 TIMM17AQ99595 171 aa12.2□□□□□ -0.46
TRAF4-203ENST00000394925 NXT2Q9NPJ8 142 aaKnown RBP12.2□□□□□ -0.46
TRAF4-203ENST00000394925 IGKV2-28A0A075B6P5 120 aa12.19□□□□□ -0.46
TRAF4-203ENST00000394925 SCO1O75880 301 aa12.19□□□□□ -0.46
TRAF4-203ENST00000394925 IGKV2D-28P01615 120 aa12.19□□□□□ -0.46
TRAF4-203ENST00000394925 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
TRAF4-203ENST00000394925 TOMM6Q96B49 74 aa12.18□□□□□ -0.46
TRAF4-203ENST00000394925 G0S2P27469 103 aa12.17□□□□□ -0.46
TRAF4-203ENST00000394925 PRLHP81277 87 aa12.16□□□□□ -0.46
TRAF4-203ENST00000394925 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
TRAF4-203ENST00000394925 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
TRAF4-203ENST00000394925 ERASQ7Z444 233 aa12.14□□□□□ -0.47
TRAF4-203ENST00000394925 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
TRAF4-203ENST00000394925 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
TRAF4-203ENST00000394925 FAM19A1Q7Z5A9 133 aa12.13□□□□□ -0.47
TRAF4-203ENST00000394925 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
TRAF4-203ENST00000394925 ADCYAP1P18509 176 aa12.12□□□□□ -0.47
TRAF4-203ENST00000394925 CTAG1AP78358 180 aa12.12□□□□□ -0.47
TRAF4-203ENST00000394925 ANAPC16Q96DE5 110 aa12.12□□□□□ -0.47
TRAF4-203ENST00000394925 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
TRAF4-203ENST00000394925 C3orf22Q8N5N4 141 aa12.11□□□□□ -0.47
TRAF4-203ENST00000394925 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
TRAF4-203ENST00000394925 TMEM126AQ9H061 195 aa12.1□□□□□ -0.47
TRAF4-203ENST00000394925 ATP5LO75964 103 aa12.09□□□□□ -0.47
TRAF4-203ENST00000394925 PFN2P35080 140 aa12.09□□□□□ -0.47
TRAF4-203ENST00000394925 KIAA1644Q3SXP7 199 aa12.09□□□□□ -0.47
TRAF4-203ENST00000394925 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
TRAF4-203ENST00000394925 VPREB1P12018 145 aa12.07□□□□□ -0.48
TRAF4-203ENST00000394925 CST9LQ9H4G1 147 aa12.07□□□□□ -0.48
TRAF4-203ENST00000394925 M0R378 163 aa12.05□□□□□ -0.48
TRAF4-203ENST00000394925 CBLN2Q8IUK8 224 aa12.04□□□□□ -0.48
TRAF4-203ENST00000394925 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
TRAF4-203ENST00000394925 SND1-IT1Q9HBX3 110 aa12.04□□□□□ -0.48
TRAF4-203ENST00000394925 H3BRM9 83 aa12.03□□□□□ -0.48
TRAF4-203ENST00000394925 PMVKQ15126 192 aa12.03□□□□□ -0.48
TRAF4-203ENST00000394925 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.49
TRAF4-203ENST00000394925 SPAG11AQ6PDA7 123 aa12.02□□□□□ -0.49
TRAF4-203ENST00000394925 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
TRAF4-203ENST00000394925 A0A1B0GVG6 124 aa12.01□□□□□ -0.49
TRAF4-203ENST00000394925 RAB14P61106 215 aa12.01□□□□□ -0.49
TRAF4-203ENST00000394925 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
TRAF4-203ENST00000394925 LINC01549A6NIU2 74 aa12□□□□□ -0.49
TRAF4-203ENST00000394925 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
TRAF4-203ENST00000394925 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
TRAF4-203ENST00000394925 ERG28Q9UKR5 140 aa12□□□□□ -0.49
TRAF4-203ENST00000394925 Q8NDZ9 215 aa11.99□□□□□ -0.49
TRAF4-203ENST00000394925 IGLV5-39A0A0G2JS06 123 aa11.98□□□□□ -0.49
TRAF4-203ENST00000394925 LINC01547P58512 204 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-203ENST00000394925 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
TRAF4-203ENST00000394925 LINC01546A6NGU7 62 aa11.97□□□□□ -0.49
TRAF4-203ENST00000394925 ZNF625Q96I27 306 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-203ENST00000394925 SPRR4Q96PI1 79 aa11.97□□□□□ -0.49
TRAF4-203ENST00000394925 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
TRAF4-203ENST00000394925 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
TRAF4-203ENST00000394925 COX17Q14061 63 aa11.95□□□□□ -0.5
TRAF4-203ENST00000394925 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
TRAF4-203ENST00000394925 DAND5Q8N907 189 aa11.94□□□□□ -0.5
TRAF4-203ENST00000394925 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-203ENST00000394925 NDUFA6P56556 154 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms