RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
ERCC2-204ENST00000391945 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
ERCC2-204ENST00000391945 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
ERCC2-204ENST00000391945 SPATA3Q8NHX4 192 aa9.06□□□□□ -0.96
ERCC2-204ENST00000391945 X6R8D5 127 aa9.05□□□□□ -0.96
ERCC2-204ENST00000391945 AMELXQ99217 191 aa9.05□□□□□ -0.96
ERCC2-204ENST00000391945 NIPBLQ6KC79 2804 aaeCLIP9.05□□□□□ -0.96
ERCC2-204ENST00000391945 BAALC-AS2P0C853 105 aa9.05□□□□□ -0.96
ERCC2-204ENST00000391945 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
ERCC2-204ENST00000391945 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
ERCC2-204ENST00000391945 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
ERCC2-204ENST00000391945 C19orf73Q9NVV2 129 aa9.04□□□□□ -0.96
ERCC2-204ENST00000391945 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
ERCC2-204ENST00000391945 SPENQ96T58 3664 aaKnown RBP9.04□□□□□ -0.96
ERCC2-204ENST00000391945 GIG44P09565 113 aaPredicted RBP9.03□□□□□ -0.96
ERCC2-204ENST00000391945 TEX49A0A1B0GTD5 131 aa9.03□□□□□ -0.96
ERCC2-204ENST00000391945 A8MTW9 85 aa9.03□□□□□ -0.96
ERCC2-204ENST00000391945 C15orf53Q8NAA6 179 aa9.03□□□□□ -0.96
ERCC2-204ENST00000391945 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
ERCC2-204ENST00000391945 LELP1Q5T871 98 aa9.02□□□□□ -0.96
ERCC2-204ENST00000391945 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.97
ERCC2-204ENST00000391945 NDUFA1O15239 70 aa9.02□□□□□ -0.97
ERCC2-204ENST00000391945 RMI2Q96E14 147 aa9.01□□□□□ -0.97
ERCC2-204ENST00000391945 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
ERCC2-204ENST00000391945 SMIM1B2RUZ4 78 aa9.01□□□□□ -0.97
ERCC2-204ENST00000391945 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
ERCC2-204ENST00000391945 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
ERCC2-204ENST00000391945 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
ERCC2-204ENST00000391945 NCR3O14931 201 aa9□□□□□ -0.97
ERCC2-204ENST00000391945 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
ERCC2-204ENST00000391945 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
ERCC2-204ENST00000391945 TRAV10A0A0B4J240 114 aa8.99□□□□□ -0.97
ERCC2-204ENST00000391945 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
ERCC2-204ENST00000391945 MT-ATP8P03928 68 aa8.98□□□□□ -0.97
ERCC2-204ENST00000391945 LECT2O14960 151 aa8.98□□□□□ -0.97
ERCC2-204ENST00000391945 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
ERCC2-204ENST00000391945 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
ERCC2-204ENST00000391945 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
ERCC2-204ENST00000391945 TENM4Q6N022 2769 aa8.98□□□□□ -0.97
ERCC2-204ENST00000391945 CXCL5P42830 114 aa8.97□□□□□ -0.97
ERCC2-204ENST00000391945 BSNQ9UPA5 3926 aa8.97□□□□□ -0.97
ERCC2-204ENST00000391945 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
ERCC2-204ENST00000391945 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
ERCC2-204ENST00000391945 HIST1H4AP62805 103 aaKnown RBP8.96□□□□□ -0.97
ERCC2-204ENST00000391945 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.97
ERCC2-204ENST00000391945 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
ERCC2-204ENST00000391945 H3BT86 120 aa8.95□□□□□ -0.98
ERCC2-204ENST00000391945 M0QXV9 152 aa8.95□□□□□ -0.98
ERCC2-204ENST00000391945 WFDC10BQ8IUB3 73 aa8.95□□□□□ -0.98
ERCC2-204ENST00000391945 Q8N3U1 123 aa8.95□□□□□ -0.98
ERCC2-204ENST00000391945 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
ERCC2-204ENST00000391945 Q8NAQ8 132 aa8.94□□□□□ -0.98
ERCC2-204ENST00000391945 C9orf116Q5BN46 136 aaPredicted RBP8.94□□□□□ -0.98
ERCC2-204ENST00000391945 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
ERCC2-204ENST00000391945 SBSPONQ8IVN8 264 aa8.94□□□□□ -0.98
ERCC2-204ENST00000391945 A0A087WZ39 114 aa8.93□□□□□ -0.98
ERCC2-204ENST00000391945 LYPD5Q6UWN5 251 aa8.93□□□□□ -0.98
ERCC2-204ENST00000391945 TIMM17BO60830 172 aa8.92□□□□□ -0.98
ERCC2-204ENST00000391945 SLPIP03973 132 aa8.92□□□□□ -0.98
ERCC2-204ENST00000391945 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
ERCC2-204ENST00000391945 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
ERCC2-204ENST00000391945 H0YGX0 51 aa8.91□□□□□ -0.98
ERCC2-204ENST00000391945 KLK5Q9Y337 293 aaPredicted RBP8.91□□□□□ -0.98
ERCC2-204ENST00000391945 A0A1B0GUV1 79 aa8.9□□□□□ -0.98
ERCC2-204ENST00000391945 CYSRT1A8MQ03 144 aa8.9□□□□□ -0.98
ERCC2-204ENST00000391945 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
ERCC2-204ENST00000391945 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.98
ERCC2-204ENST00000391945 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.99
ERCC2-204ENST00000391945 LST1O00453 97 aa8.9□□□□□ -0.99
ERCC2-204ENST00000391945 XGP55808 180 aa8.9□□□□□ -0.99
ERCC2-204ENST00000391945 IGHV3OR16-9A0A0B4J2B5 98 aa8.89□□□□□ -0.99
ERCC2-204ENST00000391945 GHRHP01286 108 aa8.88□□□□□ -0.99
ERCC2-204ENST00000391945 Q8IZM0 81 aa8.88□□□□□ -0.99
ERCC2-204ENST00000391945 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
ERCC2-204ENST00000391945 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
ERCC2-204ENST00000391945 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
ERCC2-204ENST00000391945 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
ERCC2-204ENST00000391945 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
ERCC2-204ENST00000391945 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
ERCC2-204ENST00000391945 DEFB105AQ8NG35 78 aa8.87□□□□□ -0.99
ERCC2-204ENST00000391945 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
ERCC2-204ENST00000391945 M0R2N4 97 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 UBE2BP63146 152 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 ESRGQ1W209 222 aa8.86□□□□□ -0.99
ERCC2-204ENST00000391945 HAMPP81172 84 aa8.85□□□□□ -0.99
ERCC2-204ENST00000391945 PRO0461Q9UI25 63 aa8.85□□□□□ -0.99
ERCC2-204ENST00000391945 J3KT08 172 aa8.85□□□□□ -0.99
ERCC2-204ENST00000391945 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
ERCC2-204ENST00000391945 CSMD2Q7Z408 3487 aa8.84□□□□□ -0.99
ERCC2-204ENST00000391945 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
ERCC2-204ENST00000391945 C6orf99Q4VX62 202 aa8.83□□□□□ -1
ERCC2-204ENST00000391945 KMT2BQ9UMN6 2715 aaPredicted RBP8.83□□□□□ -1
ERCC2-204ENST00000391945 FAM236AA0A1B0GUQ0 79 aa8.83□□□□□ -1
ERCC2-204ENST00000391945 FAM236BA0A1B0GV22 79 aa8.83□□□□□ -1
ERCC2-204ENST00000391945 TRACP01848 142 aa8.82□□□□□ -1
ERCC2-204ENST00000391945 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
ERCC2-204ENST00000391945 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms