RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 COPS9Q8WXC6 57 aa2.4□□□□□ -2.03
TRAV39-201ENST00000390466 SND1-IT1Q9HBX3 110 aa2.4□□□□□ -2.03
TRAV39-201ENST00000390466 PDZD2O15018 2839 aa2.4□□□□□ -2.03
TRAV39-201ENST00000390466 TRBV10-1A0A0K0K1A3 114 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 FAM236DA0A1B0GTK5 79 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 PLAC8L1A1L4L8 177 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 IBA57-AS1B1ANH7 110 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 C19orf84I3L1E1 186 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 K7EQD1 137 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 FSHBP01225 129 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 FAM236CP0DP71 79 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 PFN2P35080 140 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 XCL1P47992 114 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 SNRPD3P62318 126 aaKnown RBP2.39□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00482Q8N8I6 264 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 Q8NDZ9 215 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 SPATA3Q8NHX4 192 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 MRAPQ8TCY5 172 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 ZNF702PQ9H963 129 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 MAP6D1Q9H9H5 199 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 UBTD1Q9HAC8 227 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 XCL2Q9UBD3 114 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 SERP1Q9Y6X1 66 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 MYO9AB2RTY4 2548 aa2.39□□□□□ -2.03
TRAV39-201ENST00000390466 SPG11Q96JI7 2443 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 CELSR1Q9NYQ6 3014 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 AKAP9Q99996 3911 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 LOC110117498A0A087WWA1 95 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 A0A087WZ39 114 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 A0A1W2PRX2 142 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 SLPIP03973 132 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 GIG44P09565 113 aaPredicted RBP2.38□□□□□ -2.03
TRAV39-201ENST00000390466 GNLYP22749 145 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 DEFB131AP59861 70 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 ODF3L2Q3SX64 289 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 Q6ZQT0 140 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 C18orf65Q6ZTR6 163 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 WFDC9Q8NEX5 89 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 LRRK2Q5S007 2527 aa2.38□□□□□ -2.03
TRAV39-201ENST00000390466 ANKRD17O75179 2603 aaKnown RBP2.38□□□□□ -2.03
TRAV39-201ENST00000390466 ITPR3Q14573 2671 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 IGLV4-60A0A075B6I1 120 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 LOC100131303A0A0U1RQF7 123 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 J3QLI3 93 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 INSP01308 110 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 IGHV4-59P01825 116 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 C9orf66Q5T8R8 295 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 Q6ZTI0 123 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 Q8N814 137 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 TMEM243Q9BU79 118 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 ORMDL1Q9P0S3 153 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 APCP25054 2843 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 F8P00451 2351 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 FN1P02751 2386 aaKnown RBP2.37□□□□□ -2.03
TRAV39-201ENST00000390466 FBN2P35556 2912 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 POLQO75417 2590 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 ABCA12Q86UK0 2595 aa2.37□□□□□ -2.03
TRAV39-201ENST00000390466 ANK3Q12955 4377 aaKnown RBP2.37□□□□□ -2.03
TRAV39-201ENST00000390466 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 IGHV4-30-2A0A087WSY4 118 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 TRAV10A0A0B4J240 114 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 SLURP1P55000 103 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 RPL36AP83881 106 aaKnown RBP2.36□□□□□ -2.03
TRAV39-201ENST00000390466 DEFB112Q30KQ8 113 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 S100A7L2Q5SY68 101 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 DGAT2L7PQ6IED9 249 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 ENHOQ6UWT2 76 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00612Q8N6U2 182 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 CSNK1G2-AS1Q8NCQ2 148 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 RPL36ALQ969Q0 106 aaKnown RBP2.36□□□□□ -2.03
TRAV39-201ENST00000390466 UBE2E2Q96LR5 201 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 ESM1Q9NQ30 184 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 JMJD1CQ15652 2540 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 SETD2Q9BYW2 2564 aaPredicted RBP2.36□□□□□ -2.03
TRAV39-201ENST00000390466 CSMD2Q7Z408 3487 aa2.36□□□□□ -2.03
TRAV39-201ENST00000390466 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 JMJD7-PLA2G4BH0Y9G9 81 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 PAX4O43316 350 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 MSMBP08118 114 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 LINC01547P58512 204 aaPredicted RBP2.35□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00158P58513 81 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 DEFB136Q30KP8 78 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 DEFB114Q30KQ6 69 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 FAM229BQ4G0N7 80 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00575Q6W349 94 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 Q6ZVQ6 151 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 Q8IZM0 81 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 C11orf44Q8N8P7 122 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 RMI2Q96E14 147 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms