RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 SERF1AO75920 110 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 CKS2P33552 79 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
RPAIN-202ENST00000381208 KIAA1644Q3SXP7 199 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 PYY3Q5JQD4 70 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 ALKBH7Q9BT30 221 aaPredicted RBP8.13□□□□□ -1.11
RPAIN-202ENST00000381208 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
RPAIN-202ENST00000381208 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 F8WDY8 70 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 PPBPP02775 128 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 Q6ZRP5 223 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
RPAIN-202ENST00000381208 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
RPAIN-202ENST00000381208 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
RPAIN-202ENST00000381208 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
RPAIN-202ENST00000381208 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
RPAIN-202ENST00000381208 SPANXA1Q9NS26 97 aa8.11□□□□□ -1.11
RPAIN-202ENST00000381208 D6R8Y8 96 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
RPAIN-202ENST00000381208 CDIP1Q9H305 208 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 HSBP1O75506 76 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 TNFRSF6BO95407 300 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 LINC00310P59036 64 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 MRPS36P82909 103 aaKnown RBP8.1□□□□□ -1.11
RPAIN-202ENST00000381208 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 Q6ZUT4 128 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
RPAIN-202ENST00000381208 C5orf38Q86SI9 138 aa8.09□□□□□ -1.12
RPAIN-202ENST00000381208 ORMDL3Q8N138 153 aa8.09□□□□□ -1.12
RPAIN-202ENST00000381208 NUPR1O60356 82 aa8.08□□□□□ -1.12
RPAIN-202ENST00000381208 SPAG11BQ08648 103 aa8.08□□□□□ -1.12
RPAIN-202ENST00000381208 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
RPAIN-202ENST00000381208 MRPL35Q9NZE8 188 aaKnown RBP8.08□□□□□ -1.12
RPAIN-202ENST00000381208 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
RPAIN-202ENST00000381208 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
RPAIN-202ENST00000381208 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
RPAIN-202ENST00000381208 NPYP01303 97 aa8.07□□□□□ -1.12
RPAIN-202ENST00000381208 PRELID3AQ96N28 172 aa8.07□□□□□ -1.12
RPAIN-202ENST00000381208 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
RPAIN-202ENST00000381208 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
RPAIN-202ENST00000381208 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.06□□□□□ -1.12
RPAIN-202ENST00000381208 LINC00614P0C842 121 aa8.06□□□□□ -1.12
RPAIN-202ENST00000381208 SRSF9Q13242 221 aaKnown RBP eCLIP8.06□□□□□ -1.12
RPAIN-202ENST00000381208 TNXBP22105 4242 aa8.05□□□□□ -1.12
RPAIN-202ENST00000381208 NDUFA1O15239 70 aa8.05□□□□□ -1.12
RPAIN-202ENST00000381208 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-202ENST00000381208 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
RPAIN-202ENST00000381208 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
RPAIN-202ENST00000381208 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-202ENST00000381208 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
RPAIN-202ENST00000381208 PYGO1Q9Y3Y4 419 aa8.05□□□□□ -1.12
RPAIN-202ENST00000381208 A0A1W2PNN7 141 aa8.03□□□□□ -1.12
RPAIN-202ENST00000381208 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
RPAIN-202ENST00000381208 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
RPAIN-202ENST00000381208 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
RPAIN-202ENST00000381208 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
RPAIN-202ENST00000381208 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
RPAIN-202ENST00000381208 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
RPAIN-202ENST00000381208 HSPB8Q9UJY1 196 aa8.02□□□□□ -1.13
RPAIN-202ENST00000381208 A0A087WZ39 114 aa8.01□□□□□ -1.13
RPAIN-202ENST00000381208 KRTDAPP60985 99 aa8.01□□□□□ -1.13
RPAIN-202ENST00000381208 FAM19A2Q8N3H0 131 aa8.01□□□□□ -1.13
RPAIN-202ENST00000381208 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
RPAIN-202ENST00000381208 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
RPAIN-202ENST00000381208 C20orf202A1L168 122 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 K7EMI3 77 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 LEPROTL1O95214 131 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 PMCHL1Q16048 86 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 TEX43Q6ZNM6 134 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 LINC01561Q8N1V8 128 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 TMEM141Q96I45 108 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 C2orf88Q9BSF0 95 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
RPAIN-202ENST00000381208 NPSP0C0P6 89 aa7.99□□□□□ -1.13
RPAIN-202ENST00000381208 C3orf79P0CE67 100 aa7.99□□□□□ -1.13
RPAIN-202ENST00000381208 Q6ZN92 141 aa7.99□□□□□ -1.13
RPAIN-202ENST00000381208 NXT2Q9NPJ8 142 aaKnown RBP7.99□□□□□ -1.13
RPAIN-202ENST00000381208 CYSLTR1Q9Y271 337 aa7.99□□□□□ -1.13
RPAIN-202ENST00000381208 IGLV4-3A0A075B6K6 122 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 G0S2P27469 103 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 ORMDL2Q53FV1 153 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 C1orf137Q5JT78 98 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 Q8N8P6 123 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 VAMP8Q9BV40 100 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 MAP1LC3CQ9BXW4 147 aa7.98□□□□□ -1.13
RPAIN-202ENST00000381208 KRTAP19-4Q3LI73 84 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
RPAIN-202ENST00000381208 DIRC1Q969H9 104 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 PAPPA-AS1Q5QFB9 102 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms