RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 MUC4Q99102 2169 aa7.79□□□□□ -1.16
CLCN4-202ENST00000380833 K7EQG2 157 aa7.78□□□□□ -1.16
CLCN4-202ENST00000380833 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
CLCN4-202ENST00000380833 CSPG4Q6UVK1 2322 aa7.78□□□□□ -1.16
CLCN4-202ENST00000380833 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
CLCN4-202ENST00000380833 CDSNQ15517 529 aa7.78□□□□□ -1.16
CLCN4-202ENST00000380833 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
CLCN4-202ENST00000380833 C6orf223Q8N319 242 aa7.77□□□□□ -1.16
CLCN4-202ENST00000380833 H3BPC8 53 aa7.77□□□□□ -1.17
CLCN4-202ENST00000380833 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
CLCN4-202ENST00000380833 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
CLCN4-202ENST00000380833 A0A096LNJ9 63 aa7.76□□□□□ -1.17
CLCN4-202ENST00000380833 ODF3BA8MYP8 253 aa7.76□□□□□ -1.17
CLCN4-202ENST00000380833 ACYP2P14621 99 aa7.75□□□□□ -1.17
CLCN4-202ENST00000380833 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
CLCN4-202ENST00000380833 PRRC2AP48634 2157 aaKnown RBP7.74□□□□□ -1.17
CLCN4-202ENST00000380833 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
CLCN4-202ENST00000380833 Q6ZTC4 211 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 ARHGAP32A7KAX9 2087 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 TRAV22A0A0B4J277 110 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 PCDH15Q96QU1 1955 aa7.74□□□□□ -1.17
CLCN4-202ENST00000380833 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
CLCN4-202ENST00000380833 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
CLCN4-202ENST00000380833 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
CLCN4-202ENST00000380833 Q8IZM0 81 aa7.72□□□□□ -1.17
CLCN4-202ENST00000380833 EXPH5Q8NEV8 1989 aa7.72□□□□□ -1.17
CLCN4-202ENST00000380833 TECTAO75443 2155 aa7.71□□□□□ -1.17
CLCN4-202ENST00000380833 LINC00337Q8N6G1 96 aa7.71□□□□□ -1.17
CLCN4-202ENST00000380833 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.17
CLCN4-202ENST00000380833 AVPP01185 164 aa7.71□□□□□ -1.17
CLCN4-202ENST00000380833 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.17
CLCN4-202ENST00000380833 FHL3Q13643 280 aa7.71□□□□□ -1.18
CLCN4-202ENST00000380833 NUP210Q8TEM1 1887 aaPredicted RBP7.71□□□□□ -1.18
CLCN4-202ENST00000380833 DOPEY1Q5JWR5 2465 aa7.71□□□□□ -1.18
CLCN4-202ENST00000380833 LELP1Q5T871 98 aa7.71□□□□□ -1.18
CLCN4-202ENST00000380833 CYSRT1A8MQ03 144 aa7.7□□□□□ -1.18
CLCN4-202ENST00000380833 BRWD1-AS2P59051 145 aa7.7□□□□□ -1.18
CLCN4-202ENST00000380833 PRR9Q5T870 116 aa7.7□□□□□ -1.18
CLCN4-202ENST00000380833 UNQ6190/PRO20217Q6UXQ8 127 aa7.7□□□□□ -1.18
CLCN4-202ENST00000380833 SMIM1B2RUZ4 78 aa7.69□□□□□ -1.18
CLCN4-202ENST00000380833 COX6A2Q02221 97 aa7.69□□□□□ -1.18
CLCN4-202ENST00000380833 H7BZZ5 65 aa7.68□□□□□ -1.18
CLCN4-202ENST00000380833 PLXNB3Q9ULL4 1909 aa7.68□□□□□ -1.18
CLCN4-202ENST00000380833 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 PSMG3-AS1Q96PY0 264 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 TP53AIP1Q9HCN2 124 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 C6orf48Q9UBA6 75 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
CLCN4-202ENST00000380833 ELOF1P60002 83 aaKnown RBP7.66□□□□□ -1.18
CLCN4-202ENST00000380833 C11orf71Q6IPW1 123 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 COA5Q86WW8 74 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 Q6ZPA2 131 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 UQCR11O14957 56 aa7.66□□□□□ -1.18
CLCN4-202ENST00000380833 PRLHP81277 87 aa7.65□□□□□ -1.18
CLCN4-202ENST00000380833 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.18
CLCN4-202ENST00000380833 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
CLCN4-202ENST00000380833 LINC01546A6NGU7 62 aa7.65□□□□□ -1.18
CLCN4-202ENST00000380833 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
CLCN4-202ENST00000380833 AMELXQ99217 191 aa7.65□□□□□ -1.19
CLCN4-202ENST00000380833 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.19
CLCN4-202ENST00000380833 CDC42SE2Q9NRR3 84 aa7.65□□□□□ -1.19
CLCN4-202ENST00000380833 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
CLCN4-202ENST00000380833 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
CLCN4-202ENST00000380833 A8MTW9 85 aa7.64□□□□□ -1.19
CLCN4-202ENST00000380833 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
CLCN4-202ENST00000380833 Q9BRP9 147 aa7.63□□□□□ -1.19
CLCN4-202ENST00000380833 Q6ZQT0 140 aa7.63□□□□□ -1.19
CLCN4-202ENST00000380833 CCDC168Q8NDH2 2452 aa7.63□□□□□ -1.19
CLCN4-202ENST00000380833 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
CLCN4-202ENST00000380833 PLXNB1O43157 2135 aa7.62□□□□□ -1.19
CLCN4-202ENST00000380833 A0A1B0GW54 56 aa7.62□□□□□ -1.19
CLCN4-202ENST00000380833 NAV3Q8IVL0 2385 aa7.62□□□□□ -1.19
CLCN4-202ENST00000380833 COL4A4P53420 1690 aaPredicted RBP7.61□□□□□ -1.19
CLCN4-202ENST00000380833 IGLV4-60A0A075B6I1 120 aa7.61□□□□□ -1.19
CLCN4-202ENST00000380833 Q5XG85 94 aa7.61□□□□□ -1.19
CLCN4-202ENST00000380833 A0A087WSZ3 146 aa7.61□□□□□ -1.19
CLCN4-202ENST00000380833 TET2Q6N021 2002 aaPredicted RBP7.61□□□□□ -1.19
CLCN4-202ENST00000380833 RAI1Q7Z5J4 1906 aaPredicted RBP7.61□□□□□ -1.19
CLCN4-202ENST00000380833 CHTF8P0CG12 524 aa7.6□□□□□ -1.19
CLCN4-202ENST00000380833 J3QL48 77 aa7.6□□□□□ -1.19
CLCN4-202ENST00000380833 Q1T7F1 81 aa7.6□□□□□ -1.19
CLCN4-202ENST00000380833 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
CLCN4-202ENST00000380833 FSTL3O95633 263 aa7.58□□□□□ -1.2
CLCN4-202ENST00000380833 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
CLCN4-202ENST00000380833 NUP210LQ5VU65 1888 aa7.58□□□□□ -1.2
CLCN4-202ENST00000380833 CRIP3Q6Q6R5 217 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 ODF3L2Q3SX64 289 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 LINC01600Q96MT4 127 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 IGLV8-61A0A075B6I0 122 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 LINC00574Q9H8X3 128 aa7.57□□□□□ -1.2
CLCN4-202ENST00000380833 KLLNB2CW77 178 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms