RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 EPRSP07814 1512 aaKnown RBP0.34□□□□□ -2.35
SNAPC3-201ENST00000380799 SHPRHQ149N8 1683 aa0.34□□□□□ -2.35
SNAPC3-201ENST00000380799 GNGT1P63211 74 aa0.34□□□□□ -2.36
SNAPC3-201ENST00000380799 ZNF720Q7Z2F6 126 aa0.34□□□□□ -2.36
SNAPC3-201ENST00000380799 BAZ1AQ9NRL2 1556 aaPredicted RBP0.34□□□□□ -2.36
SNAPC3-201ENST00000380799 FANCAO15360 1455 aa0.34□□□□□ -2.36
SNAPC3-201ENST00000380799 MON2Q7Z3U7 1717 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 TTC37Q6PGP7 1564 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 F8WEM9 126 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 K7EQZ3 153 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 GYPAP02724 150 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 Q9H521 79 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 PSENENQ9NZ42 101 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 KIAA0556O60303 1618 aa0.33□□□□□ -2.36
SNAPC3-201ENST00000380799 SPRR1BP22528 89 aa0.32□□□□□ -2.36
SNAPC3-201ENST00000380799 C20orf78Q9BR46 151 aa0.32□□□□□ -2.36
SNAPC3-201ENST00000380799 HIGD1BQ9P298 99 aa0.32□□□□□ -2.36
SNAPC3-201ENST00000380799 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
SNAPC3-201ENST00000380799 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 ATP10BO94823 1461 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 HMGN3Q15651 99 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 KMT2DO14686 5537 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 PIEZO1Q92508 2521 aa0.31□□□□□ -2.36
SNAPC3-201ENST00000380799 EDC4Q6P2E9 1401 aaKnown RBP0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 LEPROTL1O95214 131 aa0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 USMG5Q96IX5 58 aa0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 V9GYS6 101 aa0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 C5P01031 1676 aa0.3□□□□□ -2.36
SNAPC3-201ENST00000380799 TSC2P49815 1807 aa0.29□□□□□ -2.36
SNAPC3-201ENST00000380799 D6R8Y8 96 aa0.29□□□□□ -2.36
SNAPC3-201ENST00000380799 MUSTN1Q8IVN3 82 aa0.29□□□□□ -2.36
SNAPC3-201ENST00000380799 SMARCA2P51531 1590 aa0.28□□□□□ -2.36
SNAPC3-201ENST00000380799 IQSEC2Q5JU85 1478 aa0.28□□□□□ -2.37
SNAPC3-201ENST00000380799 ALKAL2Q6UX46 152 aa0.27□□□□□ -2.37
SNAPC3-201ENST00000380799 CEP162Q5TB80 1403 aa0.27□□□□□ -2.37
SNAPC3-201ENST00000380799 SLIT1O75093 1534 aa0.27□□□□□ -2.37
SNAPC3-201ENST00000380799 CUX1P39880 1505 aa0.27□□□□□ -2.37
SNAPC3-201ENST00000380799 COX8AP10176 69 aa0.26□□□□□ -2.37
SNAPC3-201ENST00000380799 CCDC141Q6ZP82 1450 aa0.26□□□□□ -2.37
SNAPC3-201ENST00000380799 MYO3AQ8NEV4 1616 aa0.26□□□□□ -2.37
SNAPC3-201ENST00000380799 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
SNAPC3-201ENST00000380799 F8P00451 2351 aa0.26□□□□□ -2.37
SNAPC3-201ENST00000380799 SAMD9Q5K651 1589 aa0.25□□□□□ -2.37
SNAPC3-201ENST00000380799 FXYD6Q9H0Q3 95 aa0.25□□□□□ -2.37
SNAPC3-201ENST00000380799 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
SNAPC3-201ENST00000380799 FMN2Q9NZ56 1722 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 CRYBG1Q9Y4K1 1723 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 USF3Q68DE3 2245 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 SMIM11AP58511 58 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 PEA15Q15121 130 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 LRRC37AA6NMS7 1700 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 AHCTF1Q8WYP5 2266 aa0.24□□□□□ -2.37
SNAPC3-201ENST00000380799 HMGN2P05204 90 aaKnown RBP0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 PYY3Q5JQD4 70 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 RGPD4Q7Z3J3 1758 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 UBR1Q8IWV7 1749 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 ABCC3O15438 1527 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 C2CD3Q4AC94 2353 aa0.23□□□□□ -2.37
SNAPC3-201ENST00000380799 KIAA1551Q9HCM1 1747 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 SPTBN2O15020 2390 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 K7EP34 96 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 IGLC2P0DOY2 106 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 IGLC3P0DOY3 106 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 DEFB105AQ8NG35 78 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 UBE2D4Q9Y2X8 147 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 CSMD3Q7Z407 3707 aa0.22□□□□□ -2.37
SNAPC3-201ENST00000380799 PLCE1Q9P212 2302 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 ZFYVE26Q68DK2 2539 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 MYH4Q9Y623 1939 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 PVALEFA0A1B0GWK0 134 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 NKTRP30414 1462 aaKnown RBP0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 ZNF292O60281 2723 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 ANKRD36A6QL64 1941 aa0.21□□□□□ -2.38
SNAPC3-201ENST00000380799 RGPD3A6NKT7 1758 aaPredicted RBP0.2□□□□□ -2.38
SNAPC3-201ENST00000380799 GNG2P59768 71 aa0.2□□□□□ -2.38
SNAPC3-201ENST00000380799 KLK9Q2XQG4 91 aa0.2□□□□□ -2.38
SNAPC3-201ENST00000380799 C9orf62Q8N4C0 152 aa0.2□□□□□ -2.38
SNAPC3-201ENST00000380799 NEXMIFQ5QGS0 1516 aa0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 HRNRQ86YZ3 2850 aaPredicted RBP0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 CPSF4LA6NMK7 179 aaKnown RBP0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 I3L3M4 83 aa0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 NMSQ5H8A3 153 aa0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 S100A16Q96FQ6 103 aaKnown RBP0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 APLNQ9ULZ1 77 aa0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 PTPRZ1P23471 2315 aaPredicted RBP0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 PLIN4Q96Q06 1357 aa0.19□□□□□ -2.38
SNAPC3-201ENST00000380799 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 ALKQ9UM73 1620 aa0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 SPINK4O60575 86 aa0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 CYB5AP00167 134 aa0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 IGF2RP11717 2491 aa0.18□□□□□ -2.38
SNAPC3-201ENST00000380799 DNAJC13O75165 2243 aa0.17□□□□□ -2.38
SNAPC3-201ENST00000380799 MAST4O15021 2626 aa0.17□□□□□ -2.38
SNAPC3-201ENST00000380799 DEFB112Q30KQ8 113 aa0.17□□□□□ -2.38
SNAPC3-201ENST00000380799 PKD1L3Q7Z443 1732 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms