RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
RFC3-201ENST00000380071 HELZ2Q9BYK8 2649 aaKnown RBP8.42□□□□□ -1.06
RFC3-201ENST00000380071 IBA57-AS1B1ANH7 110 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 DEFB4AO15263 64 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 FASNP49327 2511 aaKnown RBP8.42□□□□□ -1.06
RFC3-201ENST00000380071 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 SMCR5Q8TEV8 140 aa8.42□□□□□ -1.06
RFC3-201ENST00000380071 J3QKU1 62 aa8.41□□□□□ -1.06
RFC3-201ENST00000380071 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
RFC3-201ENST00000380071 A0A087WYN8 130 aa8.4□□□□□ -1.06
RFC3-201ENST00000380071 TRBV7-7A0A0K0K1E9 115 aa8.4□□□□□ -1.06
RFC3-201ENST00000380071 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
RFC3-201ENST00000380071 PAX4O43316 350 aa8.4□□□□□ -1.07
RFC3-201ENST00000380071 SS18Q15532 418 aa8.4□□□□□ -1.07
RFC3-201ENST00000380071 LY6G6DO95868 133 aa8.39□□□□□ -1.07
RFC3-201ENST00000380071 Q8N3U1 123 aa8.39□□□□□ -1.07
RFC3-201ENST00000380071 ATP5G1P05496 136 aa8.39□□□□□ -1.07
RFC3-201ENST00000380071 MALP21145 153 aa8.38□□□□□ -1.07
RFC3-201ENST00000380071 DEFB135Q30KP9 77 aa8.38□□□□□ -1.07
RFC3-201ENST00000380071 SMIM9A6NGZ8 99 aa8.38□□□□□ -1.07
RFC3-201ENST00000380071 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
RFC3-201ENST00000380071 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
RFC3-201ENST00000380071 ACYP1P07311 99 aa8.37□□□□□ -1.07
RFC3-201ENST00000380071 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
RFC3-201ENST00000380071 TRRAPQ9Y4A5 3859 aa8.37□□□□□ -1.07
RFC3-201ENST00000380071 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
RFC3-201ENST00000380071 Q8IZM0 81 aa8.36□□□□□ -1.07
RFC3-201ENST00000380071 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
RFC3-201ENST00000380071 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
RFC3-201ENST00000380071 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
RFC3-201ENST00000380071 LYRM9A8MSI8 78 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 DNAL4O96015 105 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 H0YGX0 51 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 LECT2O14960 151 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 KIAA0087Q14695 138 aa8.34□□□□□ -1.07
RFC3-201ENST00000380071 INAFM1C9JVW0 142 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
RFC3-201ENST00000380071 SLPIP03973 132 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
RFC3-201ENST00000380071 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
RFC3-201ENST00000380071 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
RFC3-201ENST00000380071 LINC00643Q86TS7 51 aa8.32□□□□□ -1.08
RFC3-201ENST00000380071 NOTCH2Q04721 2471 aa8.32□□□□□ -1.08
RFC3-201ENST00000380071 DAD1P61803 113 aa8.32□□□□□ -1.08
RFC3-201ENST00000380071 REG3AQ06141 175 aa8.32□□□□□ -1.08
RFC3-201ENST00000380071 IMUPQ9GZP8 106 aa8.32□□□□□ -1.08
RFC3-201ENST00000380071 INAFM2P0DMQ5 153 aa8.31□□□□□ -1.08
RFC3-201ENST00000380071 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
RFC3-201ENST00000380071 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
RFC3-201ENST00000380071 NANOS2P60321 138 aaKnown RBP8.31□□□□□ -1.08
RFC3-201ENST00000380071 C3orf56Q8N813 242 aa8.31□□□□□ -1.08
RFC3-201ENST00000380071 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
RFC3-201ENST00000380071 KMT2BQ9UMN6 2715 aaPredicted RBP8.3□□□□□ -1.08
RFC3-201ENST00000380071 Q8NAQ8 132 aa8.3□□□□□ -1.08
RFC3-201ENST00000380071 NCR3O14931 201 aa8.29□□□□□ -1.08
RFC3-201ENST00000380071 HTN3P15516 51 aa8.29□□□□□ -1.08
RFC3-201ENST00000380071 APOC4P55056 127 aa8.29□□□□□ -1.08
RFC3-201ENST00000380071 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
RFC3-201ENST00000380071 Q8NDZ9 215 aa8.29□□□□□ -1.08
RFC3-201ENST00000380071 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
RFC3-201ENST00000380071 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
RFC3-201ENST00000380071 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
RFC3-201ENST00000380071 COX17Q14061 63 aa8.27□□□□□ -1.09
RFC3-201ENST00000380071 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
RFC3-201ENST00000380071 KLK5Q9Y337 293 aaPredicted RBP8.26□□□□□ -1.09
RFC3-201ENST00000380071 MIFP14174 115 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 CXCL5P42830 114 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 UNQ6190/PRO20217Q6UXQ8 127 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
RFC3-201ENST00000380071 NDUFC2O95298 119 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 SMIM20Q8N5G0 67 aa8.25□□□□□ -1.09
RFC3-201ENST00000380071 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 ATRQ13535 2644 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 IGHV4-30-4P0DP06 118 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 Q8N814 137 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
RFC3-201ENST00000380071 LELP1Q5T871 98 aa8.23□□□□□ -1.09
RFC3-201ENST00000380071 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
RFC3-201ENST00000380071 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
RFC3-201ENST00000380071 CYSRT1A8MQ03 144 aa8.22□□□□□ -1.09
RFC3-201ENST00000380071 C6orf99Q4VX62 202 aa8.22□□□□□ -1.09
RFC3-201ENST00000380071 ENHOQ6UWT2 76 aa8.22□□□□□ -1.09
RFC3-201ENST00000380071 TEP1Q99973 2627 aaKnown RBP8.22□□□□□ -1.09
RFC3-201ENST00000380071 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.09
RFC3-201ENST00000380071 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.09
RFC3-201ENST00000380071 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
RFC3-201ENST00000380071 HIVEP1P15822 2718 aa8.21□□□□□ -1.1
RFC3-201ENST00000380071 IGKV3D-7A0A0C4DH55 119 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms