RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
HERPUD1-203ENST00000379792 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 SLPIP03973 132 aa9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
HERPUD1-203ENST00000379792 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
HERPUD1-203ENST00000379792 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.94
HERPUD1-203ENST00000379792 Q6ZRU5 148 aa9.2□□□□□ -0.94
HERPUD1-203ENST00000379792 Q8N814 137 aa9.2□□□□□ -0.94
HERPUD1-203ENST00000379792 PRO1933Q9H354 126 aa9.2□□□□□ -0.94
HERPUD1-203ENST00000379792 NDUFA1O15239 70 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 C14orf177Q52M58 125 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 LINC00336Q6ZUF6 198 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 C2orf48Q96LS8 159 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 COX8AP10176 69 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
HERPUD1-203ENST00000379792 DNAH2Q9P225 4427 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 A0A0U1RRA0 63 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 CXCL5P42830 114 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 BOD1L2Q8IYS8 172 aa9.17□□□□□ -0.94
HERPUD1-203ENST00000379792 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
HERPUD1-203ENST00000379792 EREGO14944 169 aa9.16□□□□□ -0.94
HERPUD1-203ENST00000379792 LINC01620Q4KN68 170 aa9.16□□□□□ -0.94
HERPUD1-203ENST00000379792 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
HERPUD1-203ENST00000379792 PFN2P35080 140 aa9.15□□□□□ -0.94
HERPUD1-203ENST00000379792 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
HERPUD1-203ENST00000379792 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 HERV-K104P63124 156 aa9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 MEIG1Q5JSS6 88 aa9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 F8WDY8 70 aa9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 SMIM13P0DJ93 91 aa9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
HERPUD1-203ENST00000379792 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-203ENST00000379792 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
HERPUD1-203ENST00000379792 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
HERPUD1-203ENST00000379792 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
HERPUD1-203ENST00000379792 DLEU1O43261 78 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 LINC00158P58513 81 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 DAND5Q8N907 189 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 DNAH17Q9UFH2 4485 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
HERPUD1-203ENST00000379792 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
HERPUD1-203ENST00000379792 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
HERPUD1-203ENST00000379792 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
HERPUD1-203ENST00000379792 C2orf91Q6ZV80 131 aa9.1□□□□□ -0.95
HERPUD1-203ENST00000379792 LITAFQ99732 161 aa9.1□□□□□ -0.95
HERPUD1-203ENST00000379792 MIEN1Q9BRT3 115 aa9.1□□□□□ -0.95
HERPUD1-203ENST00000379792 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 C9orf163Q8N9P6 203 aa9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 RPL18AQ02543 176 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 MIR7-3HGQ8N6C7 128 aa9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
HERPUD1-203ENST00000379792 NPC2P61916 151 aa9.08□□□□□ -0.96
HERPUD1-203ENST00000379792 Q6ZRP5 223 aa9.08□□□□□ -0.96
HERPUD1-203ENST00000379792 NDUFC2-KCTD14E9PQ53 114 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 TIMM17BO60830 172 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 COX17Q14061 63 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
HERPUD1-203ENST00000379792 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 SND1-IT1Q9HBX3 110 aa9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
HERPUD1-203ENST00000379792 SRSF9Q13242 221 aaKnown RBP eCLIP9.05□□□□□ -0.96
HERPUD1-203ENST00000379792 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
HERPUD1-203ENST00000379792 A0A096LNI7 61 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 HIST1H4GQ99525 98 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 PKD1P98161 4303 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
HERPUD1-203ENST00000379792 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
HERPUD1-203ENST00000379792 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
HERPUD1-203ENST00000379792 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
HERPUD1-203ENST00000379792 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-203ENST00000379792 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
HERPUD1-203ENST00000379792 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
HERPUD1-203ENST00000379792 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-203ENST00000379792 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
HERPUD1-203ENST00000379792 PANO1I0J062 215 aa9.01□□□□□ -0.97
HERPUD1-203ENST00000379792 GCSHP23434 173 aa9.01□□□□□ -0.97
HERPUD1-203ENST00000379792 CTAG1AP78358 180 aa9.01□□□□□ -0.97
HERPUD1-203ENST00000379792 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms