RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.84■□□□□ 0.13
TM6SF1-204ENST00000379390 TSPEAR-AS2P59090 65 aa15.84■□□□□ 0.13
TM6SF1-204ENST00000379390 MAJINQ3KP22 176 aa15.84■□□□□ 0.13
TM6SF1-204ENST00000379390 PGPEP1Q9NXJ5 209 aa15.84■□□□□ 0.13
TM6SF1-204ENST00000379390 LEPROTO15243 131 aa15.83■□□□□ 0.13
TM6SF1-204ENST00000379390 JOSD1Q15040 202 aaPredicted RBP15.83■□□□□ 0.13
TM6SF1-204ENST00000379390 E9PLD3 99 aa15.83■□□□□ 0.12
TM6SF1-204ENST00000379390 CXCL5P42830 114 aa15.82■□□□□ 0.12
TM6SF1-204ENST00000379390 CDPF1Q6NVV7 123 aa15.82■□□□□ 0.12
TM6SF1-204ENST00000379390 ANKRD39Q53RE8 183 aa15.81■□□□□ 0.12
TM6SF1-204ENST00000379390 PLEKHB2Q96CS7 222 aa15.81■□□□□ 0.12
TM6SF1-204ENST00000379390 IGKV2D-26A0A0A0MRZ7 120 aa15.8■□□□□ 0.12
TM6SF1-204ENST00000379390 F8WDY8 70 aa15.8■□□□□ 0.12
TM6SF1-204ENST00000379390 J3QQQ9 107 aa15.8■□□□□ 0.12
TM6SF1-204ENST00000379390 C9orf163Q8N9P6 203 aa15.8■□□□□ 0.12
TM6SF1-204ENST00000379390 C6orf48Q9UBA6 75 aa15.8■□□□□ 0.12
TM6SF1-204ENST00000379390 PYY3Q5JQD4 70 aa15.79■□□□□ 0.12
TM6SF1-204ENST00000379390 C9orf116Q5BN46 136 aaPredicted RBP15.78■□□□□ 0.12
TM6SF1-204ENST00000379390 LGALS3P17931 250 aaKnown RBP15.77■□□□□ 0.12
TM6SF1-204ENST00000379390 ZNF625Q96I27 306 aaPredicted RBP15.77■□□□□ 0.12
TM6SF1-204ENST00000379390 NDUFA12Q9UI09 145 aa15.77■□□□□ 0.12
TM6SF1-204ENST00000379390 TRBV30A0A0K0K1B3 111 aa15.76■□□□□ 0.11
TM6SF1-204ENST00000379390 C16orf90A8MZG2 172 aa15.76■□□□□ 0.11
TM6SF1-204ENST00000379390 HSBP1L1C9JCN9 74 aa15.76■□□□□ 0.11
TM6SF1-204ENST00000379390 GCSHP23434 173 aa15.76■□□□□ 0.11
TM6SF1-204ENST00000379390 DNAH5Q8TE73 4624 aa15.75■□□□□ 0.11
TM6SF1-204ENST00000379390 NMUP48645 174 aa15.75■□□□□ 0.11
TM6SF1-204ENST00000379390 TTTY13Q9BZ97 58 aa15.74■□□□□ 0.11
TM6SF1-204ENST00000379390 LOC105371267A0A1B0GV96 52 aa15.72■□□□□ 0.11
TM6SF1-204ENST00000379390 RNF151Q2KHN1 245 aa15.72■□□□□ 0.11
TM6SF1-204ENST00000379390 KRTAP10-1P60331 282 aa15.72■□□□□ 0.11
TM6SF1-204ENST00000379390 SFTA2Q6UW10 78 aa15.72■□□□□ 0.11
TM6SF1-204ENST00000379390 MYMXA0A1B0GTQ4 84 aa15.71■□□□□ 0.11
TM6SF1-204ENST00000379390 SDIM1Q6ZPB5 146 aa15.71■□□□□ 0.11
TM6SF1-204ENST00000379390 RPL18AQ02543 176 aaKnown RBP15.69■□□□□ 0.1
TM6SF1-204ENST00000379390 VAMP8Q9BV40 100 aa15.69■□□□□ 0.1
TM6SF1-204ENST00000379390 PAM16Q9Y3D7 125 aa15.69■□□□□ 0.1
TM6SF1-204ENST00000379390 LOC107984640A0A0U1RRK4 108 aa15.68■□□□□ 0.1
TM6SF1-204ENST00000379390 ZNF815PA8K554 130 aa15.68■□□□□ 0.1
TM6SF1-204ENST00000379390 PFN2P35080 140 aa15.68■□□□□ 0.1
TM6SF1-204ENST00000379390 PCP2Q8IVA1 136 aa15.68■□□□□ 0.1
TM6SF1-204ENST00000379390 ERG28Q9UKR5 140 aa15.68■□□□□ 0.1
TM6SF1-204ENST00000379390 HERV-K104P63124 156 aa15.67■□□□□ 0.1
TM6SF1-204ENST00000379390 A0A096LNI7 61 aa15.66■□□□□ 0.1
TM6SF1-204ENST00000379390 CHTF8P0CG12 524 aa15.66■□□□□ 0.1
TM6SF1-204ENST00000379390 Q6ZRP5 223 aa15.66■□□□□ 0.1
TM6SF1-204ENST00000379390 IGKV2-24A0A0C4DH68 120 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 NDUFC2-KCTD14E9PQ53 114 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 A0A0U1RRA0 63 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 GAGE2BQ13066 116 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 SPATA45Q537H7 98 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 MEIG1Q5JSS6 88 aa15.65■□□□□ 0.1
TM6SF1-204ENST00000379390 TLX1NBP0CAT3 122 aa15.64■□□□□ 0.09
TM6SF1-204ENST00000379390 EPPK1P58107 5090 aaKnown RBP15.63■□□□□ 0.09
TM6SF1-204ENST00000379390 PANO1I0J062 215 aa15.63■□□□□ 0.09
TM6SF1-204ENST00000379390 GAGE2EQ4V326 116 aa15.63■□□□□ 0.09
TM6SF1-204ENST00000379390 GAGE2DQ9UEU5 116 aa15.63■□□□□ 0.09
TM6SF1-204ENST00000379390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.63■□□□□ 0.09
TM6SF1-204ENST00000379390 A0A0J9YXY3 114 aa15.62■□□□□ 0.09
TM6SF1-204ENST00000379390 SMIM13P0DJ93 91 aa15.62■□□□□ 0.09
TM6SF1-204ENST00000379390 FAM30AQ9NZY2 134 aa15.62■□□□□ 0.09
TM6SF1-204ENST00000379390 PKIGQ9Y2B9 76 aa15.62■□□□□ 0.09
TM6SF1-204ENST00000379390 PTTG1IPP53801 180 aa15.61■□□□□ 0.09
TM6SF1-204ENST00000379390 TP73-AS1Q9UF72 201 aa15.61■□□□□ 0.09
TM6SF1-204ENST00000379390 LINC00158P58513 81 aa15.61■□□□□ 0.09
TM6SF1-204ENST00000379390 COX17Q14061 63 aa15.6■□□□□ 0.09
TM6SF1-204ENST00000379390 DYNC1H1Q14204 4646 aaKnown RBP15.59■□□□□ 0.09
TM6SF1-204ENST00000379390 XAGE1AQ9HD64 81 aa15.58■□□□□ 0.09
TM6SF1-204ENST00000379390 LRP1BQ9NZR2 4599 aa15.58■□□□□ 0.08
TM6SF1-204ENST00000379390 SMIM6P0DI80 62 aa15.57■□□□□ 0.08
TM6SF1-204ENST00000379390 Q6ZSA8 131 aa15.57■□□□□ 0.08
TM6SF1-204ENST00000379390 SCGB1D4Q6XE38 83 aa15.57■□□□□ 0.08
TM6SF1-204ENST00000379390 SPACA4Q8TDM5 124 aa15.57■□□□□ 0.08
TM6SF1-204ENST00000379390 C14orf144Q96I85 54 aa15.57■□□□□ 0.08
TM6SF1-204ENST00000379390 COX8AP10176 69 aa15.56■□□□□ 0.08
TM6SF1-204ENST00000379390 HAMPP81172 84 aa15.56■□□□□ 0.08
TM6SF1-204ENST00000379390 DAND5Q8N907 189 aa15.56■□□□□ 0.08
TM6SF1-204ENST00000379390 LINC00587B1AMM8 73 aa15.55■□□□□ 0.08
TM6SF1-204ENST00000379390 MIR7-3HGQ8N6C7 128 aa15.55■□□□□ 0.08
TM6SF1-204ENST00000379390 S100A12P80511 92 aa15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 CIRBPQ14011 172 aaKnown RBP15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 C9orf129Q5T035 196 aaKnown RBP15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 SND1-IT1Q9HBX3 110 aa15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 DPH3Q96FX2 82 aa15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 LINC00474Q9P2X8 69 aa15.54■□□□□ 0.08
TM6SF1-204ENST00000379390 ADAMTSL4-AS1Q5T5F5 129 aa15.52■□□□□ 0.08
TM6SF1-204ENST00000379390 BOD1L2Q8IYS8 172 aa15.52■□□□□ 0.08
TM6SF1-204ENST00000379390 LITAFQ99732 161 aa15.52■□□□□ 0.08
TM6SF1-204ENST00000379390 FAM168BA1KXE4 195 aa15.5■□□□□ 0.07
TM6SF1-204ENST00000379390 A0A087WYN8 130 aa15.5■□□□□ 0.07
TM6SF1-204ENST00000379390 TIMM17BO60830 172 aa15.5■□□□□ 0.07
TM6SF1-204ENST00000379390 SCXQ7RTU7 201 aa15.49■□□□□ 0.07
TM6SF1-204ENST00000379390 DNAH8Q96JB1 4490 aa15.48■□□□□ 0.07
TM6SF1-204ENST00000379390 NPC2P61916 151 aa15.47■□□□□ 0.07
TM6SF1-204ENST00000379390 SLC25A34Q6PIV7 304 aa15.47■□□□□ 0.07
TM6SF1-204ENST00000379390 A0A1W2PNN7 141 aa15.46■□□□□ 0.07
TM6SF1-204ENST00000379390 TMEM238C9JI98 176 aa15.46■□□□□ 0.07
TM6SF1-204ENST00000379390 DLEU1O43261 78 aa15.46■□□□□ 0.07
TM6SF1-204ENST00000379390 FAM19A5Q7Z5A7 132 aaPredicted RBP15.46■□□□□ 0.07
TM6SF1-204ENST00000379390 CIRBP-AS1Q8TBR5 109 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms