RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 FAT2Q9NYQ8 4349 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 Q1RN00 199 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 Q6ZTI0 123 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 TMEM141Q96I45 108 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 STAB2Q8WWQ8 2551 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 KRTAP10-11P60412 298 aa5.1□□□□□ -1.59
GPCPD1-201ENST00000379019 C1orf158Q8N1D5 194 aa5.09□□□□□ -1.59
GPCPD1-201ENST00000379019 WWC2-AS2Q96NR7 200 aa5.09□□□□□ -1.59
GPCPD1-201ENST00000379019 UPK3BQ9BT76 320 aa5.09□□□□□ -1.59
GPCPD1-201ENST00000379019 TRAV13-1A0A0B4J241 112 aa5.09□□□□□ -1.59
GPCPD1-201ENST00000379019 C14orf132Q9NPU4 83 aa5.09□□□□□ -1.6
GPCPD1-201ENST00000379019 LENEPQ9Y5L5 61 aa5.09□□□□□ -1.6
GPCPD1-201ENST00000379019 HUWE1Q7Z6Z7 4374 aaKnown RBP5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 NCR3O14931 201 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 DSCR8Q96T75 97 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 hADV29S1A0JD25 119 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 DEFB131AP59861 70 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 TM2D3Q9BRN9 247 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 IGKV3D-7A0A0C4DH55 119 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 TRBV7-7A0A0K0K1E9 115 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 C9orf116Q5BN46 136 aaPredicted RBP5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 SPANXDQ9BXN6 97 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
GPCPD1-201ENST00000379019 LINC00526Q96FQ7 95 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 SNCGO76070 127 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 HERVK_113P61574 105 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 J3QR89 54 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 HIST1H4AP62805 103 aaKnown RBP5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 FHL2Q14192 279 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 C11orf68Q9H3H3 251 aaKnown RBP5.07□□□□□ -1.6
GPCPD1-201ENST00000379019 ODF3L2Q3SX64 289 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 Q5XG85 94 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 MED14OSP0DP75 135 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 ATXN8Q156A1 80 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 IGKV3OR2-268A0A0C4DH90 116 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 C5orf38Q86SI9 138 aa5.06□□□□□ -1.6
GPCPD1-201ENST00000379019 PLECQ15149 4684 aaKnown RBP5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 FAM19A5Q7Z5A7 132 aaPredicted RBP5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 EDA2RQ9HAV5 297 aa5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 SMIM11BQ8TCY0 68 aa5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 RPL28P46779 137 aaKnown RBP5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 HERVK_113P63121 156 aa5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 DNAH17Q9UFH2 4485 aa5.05□□□□□ -1.6
GPCPD1-201ENST00000379019 CSDC2Q9Y534 153 aaKnown RBP5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 CLPSL2Q6UWE3 100 aa5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 SNRPD3P62318 126 aaKnown RBP5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
GPCPD1-201ENST00000379019 IGHV4-30-4P0DP06 118 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 PYGO1Q9Y3Y4 419 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 NDUFA1O15239 70 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 CXCL5P42830 114 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 Q6Q795 121 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 CDC42SE2Q9NRR3 84 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 CIRBPQ14011 172 aaKnown RBP5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 MIR7-3HGQ8N6C7 128 aa5.03□□□□□ -1.6
GPCPD1-201ENST00000379019 A0A096LPF7 62 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 SMIM9A6NGZ8 99 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 CCL18P55774 89 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 MAP6D1Q9H9H5 199 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 DNAH8Q96JB1 4490 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 BAALC-AS2P0C853 105 aa5.02□□□□□ -1.61
GPCPD1-201ENST00000379019 STARD9Q9P2P6 4700 aa5.01□□□□□ -1.61
GPCPD1-201ENST00000379019 COX7A2LO14548 114 aa5.01□□□□□ -1.61
GPCPD1-201ENST00000379019 TGP01266 2768 aa5.01□□□□□ -1.61
GPCPD1-201ENST00000379019 GAGE2AQ6NT46 116 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 PFN2P35080 140 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 C10orf25Q5T742 122 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 OBSCN-AS1Q96MR7 158 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 H3BS24 57 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 NUPR2A6NF83 97 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 LYPD5Q6UWN5 251 aa5□□□□□ -1.61
GPCPD1-201ENST00000379019 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 MIFP14174 115 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 H3BT86 120 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 MUC7Q8TAX7 377 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 STHQ8IWL8 128 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 DEFB4AO15263 64 aa4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 PRKDCP78527 4128 aaKnown RBP4.99□□□□□ -1.61
GPCPD1-201ENST00000379019 NOP10Q9NPE3 64 aaKnown RBP4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 VPS13DQ5THJ4 4388 aa4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 LECT2O14960 151 aa4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 TRAV10A0A0B4J240 114 aa4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 MRPL55Q7Z7F7 128 aaKnown RBP4.98□□□□□ -1.61
GPCPD1-201ENST00000379019 C3orf22Q8N5N4 141 aa4.97□□□□□ -1.61
GPCPD1-201ENST00000379019 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
GPCPD1-201ENST00000379019 TRGV1A0A0A0MS02 117 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms