RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 LELP1Q5T871 98 aa9.42□□□□□ -0.9
NPHP4-203ENST00000378169 C16orf95Q9H693 158 aa9.42□□□□□ -0.9
NPHP4-203ENST00000378169 TMEM256-PLSCR3K7ERE1 68 aa9.42□□□□□ -0.9
NPHP4-203ENST00000378169 TIMM17BO60830 172 aa9.42□□□□□ -0.9
NPHP4-203ENST00000378169 AMELXQ99217 191 aa9.42□□□□□ -0.9
NPHP4-203ENST00000378169 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
NPHP4-203ENST00000378169 COX7BP24311 80 aa9.41□□□□□ -0.9
NPHP4-203ENST00000378169 Q8N2B8 174 aa9.41□□□□□ -0.9
NPHP4-203ENST00000378169 C11orf72Q8NBR9 251 aa9.41□□□□□ -0.9
NPHP4-203ENST00000378169 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
NPHP4-203ENST00000378169 A0A0J9YWU9 116 aa9.41□□□□□ -0.9
NPHP4-203ENST00000378169 FAM19A4Q96LR4 140 aa9.41□□□□□ -0.9
NPHP4-203ENST00000378169 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
NPHP4-203ENST00000378169 LAMA5O15230 3695 aa9.4□□□□□ -0.91
NPHP4-203ENST00000378169 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.91
NPHP4-203ENST00000378169 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 SYCNQ0VAF6 134 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 A0A1B0GX51 115 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 SMIM11BQ8TCY0 68 aa9.39□□□□□ -0.91
NPHP4-203ENST00000378169 LST1O00453 97 aa9.38□□□□□ -0.91
NPHP4-203ENST00000378169 NREPQ16612 68 aa9.38□□□□□ -0.91
NPHP4-203ENST00000378169 Q6ZTC4 211 aa9.38□□□□□ -0.91
NPHP4-203ENST00000378169 CYSRT1A8MQ03 144 aa9.38□□□□□ -0.91
NPHP4-203ENST00000378169 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
NPHP4-203ENST00000378169 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
NPHP4-203ENST00000378169 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
NPHP4-203ENST00000378169 KLK5Q9Y337 293 aaPredicted RBP9.37□□□□□ -0.91
NPHP4-203ENST00000378169 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
NPHP4-203ENST00000378169 UBE2AP49459 152 aa9.36□□□□□ -0.91
NPHP4-203ENST00000378169 A0A096LNI7 61 aa9.36□□□□□ -0.91
NPHP4-203ENST00000378169 A0A087WZ39 114 aa9.35□□□□□ -0.91
NPHP4-203ENST00000378169 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
NPHP4-203ENST00000378169 Q6ZQY7 126 aa9.35□□□□□ -0.91
NPHP4-203ENST00000378169 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
NPHP4-203ENST00000378169 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
NPHP4-203ENST00000378169 Q8IZM0 81 aa9.35□□□□□ -0.91
NPHP4-203ENST00000378169 CSDC2Q9Y534 153 aaKnown RBP9.35□□□□□ -0.91
NPHP4-203ENST00000378169 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
NPHP4-203ENST00000378169 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
NPHP4-203ENST00000378169 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
NPHP4-203ENST00000378169 FHL3Q13643 280 aa9.34□□□□□ -0.91
NPHP4-203ENST00000378169 SETXQ7Z333 2677 aaKnown RBP9.34□□□□□ -0.91
NPHP4-203ENST00000378169 FSHBP01225 129 aa9.33□□□□□ -0.92
NPHP4-203ENST00000378169 CITED1Q99966 193 aa9.32□□□□□ -0.92
NPHP4-203ENST00000378169 KLK9Q2XQG4 91 aa9.31□□□□□ -0.92
NPHP4-203ENST00000378169 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
NPHP4-203ENST00000378169 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
NPHP4-203ENST00000378169 ATOX1O00244 68 aa9.3□□□□□ -0.92
NPHP4-203ENST00000378169 XGP55808 180 aa9.3□□□□□ -0.92
NPHP4-203ENST00000378169 RNF183Q96D59 192 aa9.3□□□□□ -0.92
NPHP4-203ENST00000378169 M0R2N4 97 aa9.3□□□□□ -0.92
NPHP4-203ENST00000378169 UBR5O95071 2799 aaPredicted RBP9.3□□□□□ -0.92
NPHP4-203ENST00000378169 NOTCH1P46531 2555 aa9.3□□□□□ -0.92
NPHP4-203ENST00000378169 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
NPHP4-203ENST00000378169 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
NPHP4-203ENST00000378169 ZFHX4Q86UP3 3567 aa9.29□□□□□ -0.92
NPHP4-203ENST00000378169 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
NPHP4-203ENST00000378169 ITPR1Q14643 2758 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 RELNP78509 3460 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 UNC79Q9P2D8 2635 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
NPHP4-203ENST00000378169 NDUFV3P56181 108 aaKnown RBP9.27□□□□□ -0.93
NPHP4-203ENST00000378169 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
NPHP4-203ENST00000378169 A0A096LNT2 108 aa9.26□□□□□ -0.93
NPHP4-203ENST00000378169 NDUFS5O43920 106 aa9.26□□□□□ -0.93
NPHP4-203ENST00000378169 H3BQ85 93 aa9.26□□□□□ -0.93
NPHP4-203ENST00000378169 PDE6GP18545 87 aa9.26□□□□□ -0.93
NPHP4-203ENST00000378169 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
NPHP4-203ENST00000378169 CCKP06307 115 aa9.25□□□□□ -0.93
NPHP4-203ENST00000378169 COX17Q14061 63 aa9.25□□□□□ -0.93
NPHP4-203ENST00000378169 SMIM20Q8N5G0 67 aa9.25□□□□□ -0.93
NPHP4-203ENST00000378169 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 ZNF73O43830 326 aaPredicted RBP9.24□□□□□ -0.93
NPHP4-203ENST00000378169 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 C14orf177Q52M58 125 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
NPHP4-203ENST00000378169 TRBV10-3A0A0K0K1G6 114 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 M0R378 163 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 BPY2O14599 106 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 A0A087WYN8 130 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 A8MTW9 85 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
NPHP4-203ENST00000378169 LINC00337Q8N6G1 96 aa9.23□□□□□ -0.93
NPHP4-203ENST00000378169 ASH1LQ9NR48 2969 aaKnown RBP9.22□□□□□ -0.93
NPHP4-203ENST00000378169 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
NPHP4-203ENST00000378169 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.93
NPHP4-203ENST00000378169 X6R8D5 127 aa9.21□□□□□ -0.93
NPHP4-203ENST00000378169 Q8N3U1 123 aa9.21□□□□□ -0.94
NPHP4-203ENST00000378169 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
NPHP4-203ENST00000378169 ZANQ9Y493 2812 aa9.2□□□□□ -0.94
NPHP4-203ENST00000378169 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
NPHP4-203ENST00000378169 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms