RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NBPF19A0A087WUL8 3843 aa11.03□□□□□ -0.64
FXN-201ENST00000377270 NDUFC1O43677 76 aa11.03□□□□□ -0.64
FXN-201ENST00000377270 HTN1P15515 57 aa11.03□□□□□ -0.64
FXN-201ENST00000377270 NCR3O14931 201 aa11.02□□□□□ -0.65
FXN-201ENST00000377270 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
FXN-201ENST00000377270 ESRGQ1W209 222 aa11.01□□□□□ -0.65
FXN-201ENST00000377270 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
FXN-201ENST00000377270 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
FXN-201ENST00000377270 C4orf3Q8WVX3 66 aa11.01□□□□□ -0.65
FXN-201ENST00000377270 BCE1O60756 84 aa11□□□□□ -0.65
FXN-201ENST00000377270 NDUFA1O15239 70 aa11□□□□□ -0.65
FXN-201ENST00000377270 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
FXN-201ENST00000377270 APOC4P55056 127 aa10.99□□□□□ -0.65
FXN-201ENST00000377270 HIST2H2BCQ6DN03 193 aa10.99□□□□□ -0.65
FXN-201ENST00000377270 ZNF625Q96I27 306 aaPredicted RBP10.99□□□□□ -0.65
FXN-201ENST00000377270 H3BS24 57 aa10.98□□□□□ -0.65
FXN-201ENST00000377270 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
FXN-201ENST00000377270 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
FXN-201ENST00000377270 TRAV10A0A0B4J240 114 aa10.98□□□□□ -0.65
FXN-201ENST00000377270 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
FXN-201ENST00000377270 FLNAP21333 2647 aaKnown RBP10.97□□□□□ -0.65
FXN-201ENST00000377270 PRM2P04554 102 aa10.97□□□□□ -0.65
FXN-201ENST00000377270 CHD6Q8TD26 2715 aa10.97□□□□□ -0.65
FXN-201ENST00000377270 NF1P21359 2839 aa10.97□□□□□ -0.65
FXN-201ENST00000377270 TENM4Q6N022 2769 aa10.97□□□□□ -0.65
FXN-201ENST00000377270 MIFP14174 115 aa10.97□□□□□ -0.65
FXN-201ENST00000377270 AKAP9Q99996 3911 aa10.96□□□□□ -0.65
FXN-201ENST00000377270 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
FXN-201ENST00000377270 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.65
FXN-201ENST00000377270 A0A087WYN8 130 aa10.96□□□□□ -0.66
FXN-201ENST00000377270 DNAJC9-AS1A6NH13 148 aa10.95□□□□□ -0.66
FXN-201ENST00000377270 DEFB114Q30KQ6 69 aa10.95□□□□□ -0.66
FXN-201ENST00000377270 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
FXN-201ENST00000377270 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
FXN-201ENST00000377270 A8MTW9 85 aa10.94□□□□□ -0.66
FXN-201ENST00000377270 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
FXN-201ENST00000377270 KTN1-AS1Q86SY8 53 aa10.94□□□□□ -0.66
FXN-201ENST00000377270 Q9H8V8 135 aa10.93□□□□□ -0.66
FXN-201ENST00000377270 PROK1P58294 105 aa10.92□□□□□ -0.66
FXN-201ENST00000377270 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
FXN-201ENST00000377270 WNK1Q9H4A3 2382 aa10.92□□□□□ -0.66
FXN-201ENST00000377270 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
FXN-201ENST00000377270 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
FXN-201ENST00000377270 IGLV5-45A0A087WSX0 123 aa10.91□□□□□ -0.66
FXN-201ENST00000377270 CHCHD7Q9BUK0 85 aa10.91□□□□□ -0.66
FXN-201ENST00000377270 OVOL2Q9BRP0 275 aa10.9□□□□□ -0.66
FXN-201ENST00000377270 ACANP16112 2415 aa10.9□□□□□ -0.66
FXN-201ENST00000377270 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
FXN-201ENST00000377270 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
FXN-201ENST00000377270 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
FXN-201ENST00000377270 UBL5Q9BZL1 73 aa10.89□□□□□ -0.67
FXN-201ENST00000377270 CUBNO60494 3623 aa10.89□□□□□ -0.67
FXN-201ENST00000377270 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
FXN-201ENST00000377270 IGLV5-39A0A0G2JS06 123 aa10.88□□□□□ -0.67
FXN-201ENST00000377270 CCL24O00175 119 aa10.88□□□□□ -0.67
FXN-201ENST00000377270 INSP01308 110 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 ODF3L2Q3SX64 289 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 Q6ZSN1 163 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 PSPHP1O15172 72 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 SLPIP03973 132 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
FXN-201ENST00000377270 PDZD2O15018 2839 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 M0R378 163 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 Q6ZRP5 223 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 ITPR2Q14571 2701 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 MTORP42345 2549 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 A8MU10 97 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 LECT2O14960 151 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 COX6A2Q02221 97 aa10.86□□□□□ -0.67
FXN-201ENST00000377270 PF4P02776 101 aa10.85□□□□□ -0.67
FXN-201ENST00000377270 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
FXN-201ENST00000377270 KRTAP1-1Q07627 177 aa10.85□□□□□ -0.67
FXN-201ENST00000377270 Q1T7F1 81 aa10.85□□□□□ -0.67
FXN-201ENST00000377270 LINC00588Q9Y4M8 146 aa10.85□□□□□ -0.67
FXN-201ENST00000377270 IGHV3OR16-12A0A075B7B8 117 aa10.84□□□□□ -0.67
FXN-201ENST00000377270 TMEM254Q8TBM7 123 aa10.84□□□□□ -0.67
FXN-201ENST00000377270 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
FXN-201ENST00000377270 Q6ZTC4 211 aa10.84□□□□□ -0.67
FXN-201ENST00000377270 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
FXN-201ENST00000377270 NIPBLQ6KC79 2804 aaeCLIP10.83□□□□□ -0.686e-7■■■□□ 15
FXN-201ENST00000377270 ORMDL1Q9P0S3 153 aa10.83□□□□□ -0.68
FXN-201ENST00000377270 HELZ2Q9BYK8 2649 aaKnown RBP10.82□□□□□ -0.68
FXN-201ENST00000377270 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
FXN-201ENST00000377270 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
FXN-201ENST00000377270 CRPP02741 224 aa10.82□□□□□ -0.68
FXN-201ENST00000377270 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
FXN-201ENST00000377270 PLA2G2AP14555 144 aa10.81□□□□□ -0.68
FXN-201ENST00000377270 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 NOTCH3Q9UM47 2321 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 IGHV3-38A0A0C4DH36 116 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 J3QKU1 62 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 TMEM256-PLSCR3K7ERE1 68 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 RNASE1P07998 156 aaKnown RBP10.8□□□□□ -0.68
FXN-201ENST00000377270 Q6ZTI0 123 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
FXN-201ENST00000377270 LINC00337Q8N6G1 96 aa10.79□□□□□ -0.68
FXN-201ENST00000377270 JMJD1CQ15652 2540 aa10.78□□□□□ -0.68
FXN-201ENST00000377270 ANK3Q12955 4377 aaKnown RBP10.78□□□□□ -0.68
FXN-201ENST00000377270 H0YGX0 51 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms