RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 UQCRQO14949 82 aa10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 LINC00959A0A1B0GUT2 108 aa10.54□□□□□ -0.72
UBQLN1-202ENST00000376395 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
UBQLN1-202ENST00000376395 A0A087WYN8 130 aa10.54□□□□□ -0.72
UBQLN1-202ENST00000376395 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
UBQLN1-202ENST00000376395 NKAPP1Q8N9T2 125 aa10.54□□□□□ -0.72
UBQLN1-202ENST00000376395 A0A087WVE0 104 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 SBSPONQ8IVN8 264 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 ATRQ13535 2644 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
UBQLN1-202ENST00000376395 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.72
UBQLN1-202ENST00000376395 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
UBQLN1-202ENST00000376395 LINC00337Q8N6G1 96 aa10.52□□□□□ -0.73
UBQLN1-202ENST00000376395 FBN2P35556 2912 aa10.52□□□□□ -0.73
UBQLN1-202ENST00000376395 ENHOQ6UWT2 76 aa10.52□□□□□ -0.73
UBQLN1-202ENST00000376395 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
UBQLN1-202ENST00000376395 NF1P21359 2839 aa10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 C20orf197Q8N268 126 aa10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 Q6Q795 121 aa10.51□□□□□ -0.73
UBQLN1-202ENST00000376395 CXCL5P42830 114 aa10.5□□□□□ -0.73
UBQLN1-202ENST00000376395 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
UBQLN1-202ENST00000376395 J3KT08 172 aa10.49□□□□□ -0.73
UBQLN1-202ENST00000376395 DEFB121Q5J5C9 76 aa10.49□□□□□ -0.73
UBQLN1-202ENST00000376395 C9orf66Q5T8R8 295 aa10.49□□□□□ -0.73
UBQLN1-202ENST00000376395 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
UBQLN1-202ENST00000376395 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
UBQLN1-202ENST00000376395 J3QKU1 62 aa10.48□□□□□ -0.73
UBQLN1-202ENST00000376395 LRRC75A-AS1Q8N1F1 130 aa10.48□□□□□ -0.73
UBQLN1-202ENST00000376395 SMR3AQ99954 134 aa10.48□□□□□ -0.73
UBQLN1-202ENST00000376395 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
UBQLN1-202ENST00000376395 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
UBQLN1-202ENST00000376395 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
UBQLN1-202ENST00000376395 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
UBQLN1-202ENST00000376395 IGLV5-39A0A0G2JS06 123 aa10.46□□□□□ -0.74
UBQLN1-202ENST00000376395 A8MTW9 85 aa10.46□□□□□ -0.74
UBQLN1-202ENST00000376395 ZNF843Q8N446 348 aa10.46□□□□□ -0.74
UBQLN1-202ENST00000376395 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.74
UBQLN1-202ENST00000376395 Q6ZQY7 126 aa10.45□□□□□ -0.74
UBQLN1-202ENST00000376395 A0A087WZ39 114 aa10.44□□□□□ -0.74
UBQLN1-202ENST00000376395 M0QXV9 152 aa10.43□□□□□ -0.74
UBQLN1-202ENST00000376395 NHLRC4P0CG21 123 aaPredicted RBP10.43□□□□□ -0.74
UBQLN1-202ENST00000376395 FHL2Q14192 279 aa10.43□□□□□ -0.74
UBQLN1-202ENST00000376395 COX7CP15954 63 aa10.43□□□□□ -0.74
UBQLN1-202ENST00000376395 CD164L2Q6UWJ8 174 aa10.43□□□□□ -0.74
UBQLN1-202ENST00000376395 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
UBQLN1-202ENST00000376395 LINC00846Q9NV44 126 aa10.41□□□□□ -0.74
UBQLN1-202ENST00000376395 F8WEM9 126 aa10.41□□□□□ -0.74
UBQLN1-202ENST00000376395 NREPQ16612 68 aa10.41□□□□□ -0.74
UBQLN1-202ENST00000376395 COX7BP24311 80 aa10.4□□□□□ -0.74
UBQLN1-202ENST00000376395 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
UBQLN1-202ENST00000376395 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
UBQLN1-202ENST00000376395 MRAPQ8TCY5 172 aa10.4□□□□□ -0.74
UBQLN1-202ENST00000376395 PSCAO43653 123 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 Q8N3U1 123 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 Q8IZM0 81 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
UBQLN1-202ENST00000376395 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 HELZ2Q9BYK8 2649 aaKnown RBP10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 FAM104AQ969W3 186 aa10.38□□□□□ -0.75
UBQLN1-202ENST00000376395 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
UBQLN1-202ENST00000376395 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
UBQLN1-202ENST00000376395 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
UBQLN1-202ENST00000376395 UBE2BP63146 152 aa10.37□□□□□ -0.75
UBQLN1-202ENST00000376395 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
UBQLN1-202ENST00000376395 IGKV2-28A0A075B6P5 120 aa10.36□□□□□ -0.75
UBQLN1-202ENST00000376395 INAFM1C9JVW0 142 aa10.36□□□□□ -0.75
UBQLN1-202ENST00000376395 IGKV2D-28P01615 120 aa10.36□□□□□ -0.75
UBQLN1-202ENST00000376395 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
UBQLN1-202ENST00000376395 HILS1P60008 231 aa10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 Q8N814 137 aa10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 SETXQ7Z333 2677 aaKnown RBP10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 SNURFQ9Y675 71 aa10.35□□□□□ -0.75
UBQLN1-202ENST00000376395 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
UBQLN1-202ENST00000376395 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBQLN1-202ENST00000376395 Q6JHZ5 121 aa10.34□□□□□ -0.75
UBQLN1-202ENST00000376395 FAM19A1Q7Z5A9 133 aa10.34□□□□□ -0.75
UBQLN1-202ENST00000376395 MXRA5Q9NR99 2828 aa10.33□□□□□ -0.76
UBQLN1-202ENST00000376395 CCKP06307 115 aa10.33□□□□□ -0.76
UBQLN1-202ENST00000376395 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
UBQLN1-202ENST00000376395 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
UBQLN1-202ENST00000376395 C9orf129Q5T035 196 aaKnown RBP10.31□□□□□ -0.76
UBQLN1-202ENST00000376395 PDE6GP18545 87 aa10.3□□□□□ -0.76
UBQLN1-202ENST00000376395 ATP5EP2Q5VTU8 51 aa10.3□□□□□ -0.76
UBQLN1-202ENST00000376395 TRBV10-3A0A0K0K1G6 114 aa10.29□□□□□ -0.76
UBQLN1-202ENST00000376395 KIR2DL5BQ8NHK3 375 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms