RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 A0A096LNI7 61 aa10.58□□□□□ -0.72
H2AFX-201ENST00000375167 C15orf56Q8N910 161 aa10.58□□□□□ -0.72
H2AFX-201ENST00000375167 SERF1AO75920 110 aa10.57□□□□□ -0.72
H2AFX-201ENST00000375167 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
H2AFX-201ENST00000375167 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
H2AFX-201ENST00000375167 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
H2AFX-201ENST00000375167 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
H2AFX-201ENST00000375167 AMELXQ99217 191 aa10.55□□□□□ -0.72
H2AFX-201ENST00000375167 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
H2AFX-201ENST00000375167 IGHV1-58A0A0C4DH39 117 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 LEPROTL1O95214 131 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 APOMO95445 188 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 S100A6P06703 90 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 MALP21145 153 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 NDUFA6P56556 154 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 PMVKQ15126 192 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 PACRGQ96M98 296 aaPredicted RBP10.54□□□□□ -0.72
H2AFX-201ENST00000375167 PKIGQ9Y2B9 76 aa10.54□□□□□ -0.72
H2AFX-201ENST00000375167 COX7A2LO14548 114 aa10.53□□□□□ -0.72
H2AFX-201ENST00000375167 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
H2AFX-201ENST00000375167 HERVK_113P63121 156 aa10.53□□□□□ -0.72
H2AFX-201ENST00000375167 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
H2AFX-201ENST00000375167 GEMIN7Q9H840 131 aaKnown RBP10.53□□□□□ -0.72
H2AFX-201ENST00000375167 MUC17Q685J3 4493 aa10.53□□□□□ -0.72
H2AFX-201ENST00000375167 KRTAP9-7A8MTY7 169 aa10.52□□□□□ -0.72
H2AFX-201ENST00000375167 HIGD2BQ4VC39 106 aa10.52□□□□□ -0.72
H2AFX-201ENST00000375167 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.72
H2AFX-201ENST00000375167 DIRC1Q969H9 104 aa10.52□□□□□ -0.72
H2AFX-201ENST00000375167 IFI27L1Q96BM0 104 aa10.52□□□□□ -0.72
H2AFX-201ENST00000375167 A0A096LNJ9 63 aa10.52□□□□□ -0.73
H2AFX-201ENST00000375167 UBE2D1P51668 147 aa10.52□□□□□ -0.73
H2AFX-201ENST00000375167 LINC00310P59036 64 aa10.52□□□□□ -0.73
H2AFX-201ENST00000375167 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
H2AFX-201ENST00000375167 CST9LQ9H4G1 147 aa10.51□□□□□ -0.73
H2AFX-201ENST00000375167 IGHV3OR16-9A0A0B4J2B5 98 aa10.5□□□□□ -0.73
H2AFX-201ENST00000375167 NUPR1O60356 82 aa10.5□□□□□ -0.73
H2AFX-201ENST00000375167 SNRPEP62304 92 aaKnown RBP10.5□□□□□ -0.73
H2AFX-201ENST00000375167 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
H2AFX-201ENST00000375167 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
H2AFX-201ENST00000375167 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
H2AFX-201ENST00000375167 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
H2AFX-201ENST00000375167 LINC00173Q6ZV60 143 aa10.49□□□□□ -0.73
H2AFX-201ENST00000375167 LINC01561Q8N1V8 128 aa10.49□□□□□ -0.73
H2AFX-201ENST00000375167 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
H2AFX-201ENST00000375167 TRAV12-1A0A0B4J245 112 aa10.48□□□□□ -0.73
H2AFX-201ENST00000375167 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
H2AFX-201ENST00000375167 H3BRM9 83 aa10.48□□□□□ -0.73
H2AFX-201ENST00000375167 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
H2AFX-201ENST00000375167 ZC2HC1BQ5TFG8 222 aa10.48□□□□□ -0.73
H2AFX-201ENST00000375167 S100A2P29034 98 aa10.47□□□□□ -0.73
H2AFX-201ENST00000375167 C1orf137Q5JT78 98 aa10.47□□□□□ -0.73
H2AFX-201ENST00000375167 FABP4P15090 132 aa10.46□□□□□ -0.74
H2AFX-201ENST00000375167 LINC00526Q96FQ7 95 aa10.46□□□□□ -0.74
H2AFX-201ENST00000375167 A0A087WZ39 114 aa10.45□□□□□ -0.74
H2AFX-201ENST00000375167 AKR1D1P51857 326 aa10.45□□□□□ -0.74
H2AFX-201ENST00000375167 LINC00469Q8N7U9 141 aa10.45□□□□□ -0.74
H2AFX-201ENST00000375167 OR10D4PQ8NGN7 298 aa10.45□□□□□ -0.74
H2AFX-201ENST00000375167 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
H2AFX-201ENST00000375167 H0Y9J4 135 aa10.44□□□□□ -0.74
H2AFX-201ENST00000375167 SYCNQ0VAF6 134 aa10.44□□□□□ -0.74
H2AFX-201ENST00000375167 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
H2AFX-201ENST00000375167 F8VRH5 84 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 F8WDY8 70 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 HIST3H2BBQ8N257 126 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 C2orf48Q96LS8 159 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 CARD19Q96LW7 228 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
H2AFX-201ENST00000375167 TSPAN13O95857 204 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 PRSS2P07478 247 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 PLNP26678 52 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 SPAG11BQ08648 103 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 ORAOV1Q8WV07 137 aa10.42□□□□□ -0.74
H2AFX-201ENST00000375167 H0Y8G0 127 aa10.41□□□□□ -0.74
H2AFX-201ENST00000375167 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
H2AFX-201ENST00000375167 C20orf202A1L168 122 aa10.4□□□□□ -0.74
H2AFX-201ENST00000375167 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
H2AFX-201ENST00000375167 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.74
H2AFX-201ENST00000375167 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
H2AFX-201ENST00000375167 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
H2AFX-201ENST00000375167 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
H2AFX-201ENST00000375167 PET117Q6UWS5 81 aa10.39□□□□□ -0.75
H2AFX-201ENST00000375167 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
H2AFX-201ENST00000375167 CXCL5P42830 114 aa10.38□□□□□ -0.75
H2AFX-201ENST00000375167 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
H2AFX-201ENST00000375167 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
H2AFX-201ENST00000375167 DPM2O94777 84 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 CKS1BP61024 79 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 RNF151Q2KHN1 245 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 Q8IZM0 81 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 HIST1H2BLQ99880 126 aa10.37□□□□□ -0.75
H2AFX-201ENST00000375167 NDUFA1O15239 70 aa10.36□□□□□ -0.75
H2AFX-201ENST00000375167 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
H2AFX-201ENST00000375167 HERVK_113P61574 105 aa10.36□□□□□ -0.75
H2AFX-201ENST00000375167 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
H2AFX-201ENST00000375167 IGKCP01834 107 aa10.35□□□□□ -0.75
H2AFX-201ENST00000375167 KRTDAPP60985 99 aa10.35□□□□□ -0.75
H2AFX-201ENST00000375167 LOC107984640A0A0U1RRK4 108 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms