RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 Q8IZM0 81 aa10.56□□□□□ -0.72
NOTCH4-201ENST00000375023 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
NOTCH4-201ENST00000375023 LINC01547P58512 204 aaPredicted RBP10.55□□□□□ -0.72
NOTCH4-201ENST00000375023 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
NOTCH4-201ENST00000375023 MRPS36P82909 103 aaKnown RBP10.54□□□□□ -0.72
NOTCH4-201ENST00000375023 CCDC168Q8NDH2 2452 aa10.53□□□□□ -0.72
NOTCH4-201ENST00000375023 COX17Q14061 63 aa10.53□□□□□ -0.72
NOTCH4-201ENST00000375023 CHCHD7Q9BUK0 85 aa10.53□□□□□ -0.72
NOTCH4-201ENST00000375023 GOLGB1Q14789 3259 aaKnown RBP10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 PRO3102Q9H379 93 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 A0A1W2PPR1 153 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 CHTF8P0CG12 524 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 FHL2Q14192 279 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 YPEL4Q96NS1 127 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 Q9BRP9 147 aa10.52□□□□□ -0.72
NOTCH4-201ENST00000375023 PRLHP81277 87 aa10.52□□□□□ -0.73
NOTCH4-201ENST00000375023 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
NOTCH4-201ENST00000375023 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
NOTCH4-201ENST00000375023 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
NOTCH4-201ENST00000375023 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
NOTCH4-201ENST00000375023 IGIPA6NJ69 53 aa10.51□□□□□ -0.73
NOTCH4-201ENST00000375023 FSTL3O95633 263 aa10.51□□□□□ -0.73
NOTCH4-201ENST00000375023 Q8N814 137 aa10.51□□□□□ -0.73
NOTCH4-201ENST00000375023 TRBV7-6A0A0J9YX20 115 aa10.51□□□□□ -0.73
NOTCH4-201ENST00000375023 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
NOTCH4-201ENST00000375023 NHLRC4P0CG21 123 aaPredicted RBP10.5□□□□□ -0.73
NOTCH4-201ENST00000375023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
NOTCH4-201ENST00000375023 CACNA1AO00555 2505 aa10.5□□□□□ -0.73
NOTCH4-201ENST00000375023 Q9UF83 564 aa10.5□□□□□ -0.73
NOTCH4-201ENST00000375023 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
NOTCH4-201ENST00000375023 PSPHP1O15172 72 aa10.48□□□□□ -0.73
NOTCH4-201ENST00000375023 LINC00575Q6W349 94 aa10.48□□□□□ -0.73
NOTCH4-201ENST00000375023 ADAMTS20P59510 1910 aa10.48□□□□□ -0.73
NOTCH4-201ENST00000375023 A0A087WSZ3 146 aa10.47□□□□□ -0.73
NOTCH4-201ENST00000375023 IGLV1-51P01701 117 aa10.47□□□□□ -0.73
NOTCH4-201ENST00000375023 CPAMD8Q8IZJ3 1885 aa10.47□□□□□ -0.73
NOTCH4-201ENST00000375023 WDR87Q6ZQQ6 2873 aa10.47□□□□□ -0.73
NOTCH4-201ENST00000375023 COX7CP15954 63 aa10.46□□□□□ -0.74
NOTCH4-201ENST00000375023 URB1-AS1Q96HZ7 61 aa10.46□□□□□ -0.74
NOTCH4-201ENST00000375023 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
NOTCH4-201ENST00000375023 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 KRTAP24-1Q3LI83 254 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 FHL3Q13643 280 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 V9GYY9 64 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 MYO18BQ8IUG5 2567 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 LRP4O75096 1905 aa10.44□□□□□ -0.74
NOTCH4-201ENST00000375023 Q6ZRU5 148 aa10.43□□□□□ -0.74
NOTCH4-201ENST00000375023 EP400Q96L91 3159 aa10.42□□□□□ -0.74
NOTCH4-201ENST00000375023 MUC7Q8TAX7 377 aa10.42□□□□□ -0.74
NOTCH4-201ENST00000375023 CRYGAP11844 174 aa10.42□□□□□ -0.74
NOTCH4-201ENST00000375023 NDUFC1O43677 76 aa10.42□□□□□ -0.74
NOTCH4-201ENST00000375023 LINC00310P59036 64 aa10.4□□□□□ -0.74
NOTCH4-201ENST00000375023 Q6JHZ5 121 aa10.4□□□□□ -0.74
NOTCH4-201ENST00000375023 MUC22E2RYF6 1773 aaPredicted RBP10.4□□□□□ -0.74
NOTCH4-201ENST00000375023 H0Y9P7 68 aa10.4□□□□□ -0.75
NOTCH4-201ENST00000375023 HCG22E2RYF7 251 aa10.39□□□□□ -0.75
NOTCH4-201ENST00000375023 Q8N3U1 123 aa10.39□□□□□ -0.75
NOTCH4-201ENST00000375023 WWC2-AS2Q96NR7 200 aa10.38□□□□□ -0.75
NOTCH4-201ENST00000375023 NAV2Q8IVL1 2488 aa10.38□□□□□ -0.75
NOTCH4-201ENST00000375023 ATP5EP56381 51 aaPredicted RBP10.37□□□□□ -0.75
NOTCH4-201ENST00000375023 IGF2RP11717 2491 aa10.37□□□□□ -0.75
NOTCH4-201ENST00000375023 C1orf195Q5TG92 126 aa10.37□□□□□ -0.75
NOTCH4-201ENST00000375023 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
NOTCH4-201ENST00000375023 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
NOTCH4-201ENST00000375023 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
NOTCH4-201ENST00000375023 TRAV7A0A075B6U4 112 aa10.34□□□□□ -0.75
NOTCH4-201ENST00000375023 TYMSOSQ8TAI1 123 aa10.34□□□□□ -0.75
NOTCH4-201ENST00000375023 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
NOTCH4-201ENST00000375023 SMCR5Q8TEV8 140 aa10.34□□□□□ -0.75
NOTCH4-201ENST00000375023 TRBV7-7A0A0K0K1E9 115 aa10.33□□□□□ -0.76
NOTCH4-201ENST00000375023 RTL8CO15255 209 aa10.32□□□□□ -0.76
NOTCH4-201ENST00000375023 CENPFP49454 3210 aa10.32□□□□□ -0.76
NOTCH4-201ENST00000375023 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
NOTCH4-201ENST00000375023 C16orf95Q9H693 158 aa10.32□□□□□ -0.76
NOTCH4-201ENST00000375023 MOBPQ13875 183 aa10.31□□□□□ -0.76
NOTCH4-201ENST00000375023 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
NOTCH4-201ENST00000375023 NCOR2Q9Y618 2525 aa10.31□□□□□ -0.76
NOTCH4-201ENST00000375023 AMELXQ99217 191 aa10.3□□□□□ -0.76
NOTCH4-201ENST00000375023 LIMD2Q9BT23 127 aa10.3□□□□□ -0.76
NOTCH4-201ENST00000375023 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
NOTCH4-201ENST00000375023 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
NOTCH4-201ENST00000375023 A0A096LNJ9 63 aa10.27□□□□□ -0.76
NOTCH4-201ENST00000375023 CDIP1Q9H305 208 aa10.27□□□□□ -0.76
NOTCH4-201ENST00000375023 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
NOTCH4-201ENST00000375023 SMIM26A0A096LP01 95 aa10.26□□□□□ -0.77
NOTCH4-201ENST00000375023 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
NOTCH4-201ENST00000375023 PHF5AQ7RTV0 110 aaKnown RBP10.26□□□□□ -0.77
NOTCH4-201ENST00000375023 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
NOTCH4-201ENST00000375023 C1orf64Q8NEQ6 169 aa10.24□□□□□ -0.77
NOTCH4-201ENST00000375023 LINC00315P59091 139 aa10.23□□□□□ -0.77
NOTCH4-201ENST00000375023 A0A1B0GUV1 79 aa10.22□□□□□ -0.77
NOTCH4-201ENST00000375023 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.78
NOTCH4-201ENST00000375023 JMJD1CQ15652 2540 aa10.21□□□□□ -0.78
NOTCH4-201ENST00000375023 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
NOTCH4-201ENST00000375023 M0R2T5 61 aa10.2□□□□□ -0.78
NOTCH4-201ENST00000375023 PTPRBP23467 1997 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms