RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 FAM236DA0A1B0GTK5 79 aa13.87□□□□□ -0.19
TGFBR1-201ENST00000374990 FAM236CP0DP71 79 aa13.87□□□□□ -0.19
TGFBR1-201ENST00000374990 SMR3AQ99954 134 aa13.87□□□□□ -0.19
TGFBR1-201ENST00000374990 PCSK5Q92824 1860 aa13.87□□□□□ -0.19
TGFBR1-201ENST00000374990 Q8N814 137 aa13.87□□□□□ -0.19
TGFBR1-201ENST00000374990 C4orf48Q5BLP8 95 aa13.86□□□□□ -0.19
TGFBR1-201ENST00000374990 NDUFC1O43677 76 aa13.86□□□□□ -0.19
TGFBR1-201ENST00000374990 LOC107984640A0A0U1RRK4 108 aa13.85□□□□□ -0.19
TGFBR1-201ENST00000374990 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.83□□□□□ -0.2
TGFBR1-201ENST00000374990 C3orf84H3BNL1 204 aa13.82□□□□□ -0.2
TGFBR1-201ENST00000374990 C9orf116Q5BN46 136 aaPredicted RBP13.82□□□□□ -0.2
TGFBR1-201ENST00000374990 FLNBO75369 2602 aaKnown RBP13.82□□□□□ -0.2
TGFBR1-201ENST00000374990 A0A096LNI7 61 aa13.81□□□□□ -0.2
TGFBR1-201ENST00000374990 NANOS2P60321 138 aaKnown RBP13.81□□□□□ -0.2
TGFBR1-201ENST00000374990 A0A0J9YWU9 116 aa13.81□□□□□ -0.2
TGFBR1-201ENST00000374990 TRBV10-3A0A0K0K1G6 114 aa13.81□□□□□ -0.2
TGFBR1-201ENST00000374990 FAM19A3Q7Z5A8 133 aa13.81□□□□□ -0.2
TGFBR1-201ENST00000374990 UTRNP46939 3433 aa13.8□□□□□ -0.2
TGFBR1-201ENST00000374990 IGHV3OR16-9A0A0B4J2B5 98 aa13.8□□□□□ -0.2
TGFBR1-201ENST00000374990 CHD7Q9P2D1 2997 aa13.8□□□□□ -0.2
TGFBR1-201ENST00000374990 F8WDY8 70 aa13.79□□□□□ -0.2
TGFBR1-201ENST00000374990 C5orf47Q569G3 176 aa13.79□□□□□ -0.2
TGFBR1-201ENST00000374990 CCDC179H3BU77 68 aa13.79□□□□□ -0.2
TGFBR1-201ENST00000374990 FHL3Q13643 280 aa13.79□□□□□ -0.2
TGFBR1-201ENST00000374990 CHKB-CPT1BH3BT56 60 aa13.78□□□□□ -0.2
TGFBR1-201ENST00000374990 IGLV5-45A0A087WSX0 123 aa13.78□□□□□ -0.2
TGFBR1-201ENST00000374990 A0A087WYN8 130 aa13.78□□□□□ -0.2
TGFBR1-201ENST00000374990 ATP5EP56381 51 aaPredicted RBP13.78□□□□□ -0.2
TGFBR1-201ENST00000374990 PRR3P79522 188 aaKnown RBP13.76□□□□□ -0.21
TGFBR1-201ENST00000374990 F8P00451 2351 aa13.76□□□□□ -0.21
TGFBR1-201ENST00000374990 Q6ZTC4 211 aa13.76□□□□□ -0.21
TGFBR1-201ENST00000374990 LINC00337Q8N6G1 96 aa13.76□□□□□ -0.21
TGFBR1-201ENST00000374990 C2orf48Q96LS8 159 aa13.76□□□□□ -0.21
TGFBR1-201ENST00000374990 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
TGFBR1-201ENST00000374990 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
TGFBR1-201ENST00000374990 RPL37AP8A6NKH3 93 aa13.73□□□□□ -0.21
TGFBR1-201ENST00000374990 PCNTO95613 3336 aa13.73□□□□□ -0.21
TGFBR1-201ENST00000374990 LINC00474Q9P2X8 69 aa13.73□□□□□ -0.21
TGFBR1-201ENST00000374990 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
TGFBR1-201ENST00000374990 LYPD5Q6UWN5 251 aa13.71□□□□□ -0.21
TGFBR1-201ENST00000374990 IGKV4-1P06312 121 aa13.71□□□□□ -0.22
TGFBR1-201ENST00000374990 RETNQ9HD89 108 aa13.7□□□□□ -0.22
TGFBR1-201ENST00000374990 ZNF706Q9Y5V0 76 aaPredicted RBP13.7□□□□□ -0.22
TGFBR1-201ENST00000374990 TRAV7A0A075B6U4 112 aa13.69□□□□□ -0.22
TGFBR1-201ENST00000374990 FSHBP01225 129 aa13.69□□□□□ -0.22
TGFBR1-201ENST00000374990 CDIP1Q9H305 208 aa13.69□□□□□ -0.22
TGFBR1-201ENST00000374990 PRO0461Q9UI25 63 aa13.68□□□□□ -0.22
TGFBR1-201ENST00000374990 LINC00575Q6W349 94 aa13.68□□□□□ -0.22
TGFBR1-201ENST00000374990 WFDC10BQ8IUB3 73 aa13.66□□□□□ -0.22
TGFBR1-201ENST00000374990 C1orf137Q5JT78 98 aa13.66□□□□□ -0.22
TGFBR1-201ENST00000374990 SMCPP49901 116 aaPredicted RBP13.65□□□□□ -0.22
TGFBR1-201ENST00000374990 C6orf223Q8N319 242 aa13.65□□□□□ -0.22
TGFBR1-201ENST00000374990 PPDPFQ9H3Y8 114 aa13.65□□□□□ -0.22
TGFBR1-201ENST00000374990 SNURFQ9Y675 71 aa13.64□□□□□ -0.23
TGFBR1-201ENST00000374990 A0A087WVE0 104 aa13.64□□□□□ -0.23
TGFBR1-201ENST00000374990 C7orf33Q8WU49 177 aa13.64□□□□□ -0.23
TGFBR1-201ENST00000374990 Q9UF83 564 aa13.64□□□□□ -0.23
TGFBR1-201ENST00000374990 WFDC13Q8IUB5 93 aa13.63□□□□□ -0.23
TGFBR1-201ENST00000374990 TRBV7-7A0A0K0K1E9 115 aa13.62□□□□□ -0.23
TGFBR1-201ENST00000374990 LINC00846Q9NV44 126 aa13.62□□□□□ -0.23
TGFBR1-201ENST00000374990 CHD9Q3L8U1 2897 aa13.61□□□□□ -0.23
TGFBR1-201ENST00000374990 USP24Q9UPU5 2620 aa13.61□□□□□ -0.23
TGFBR1-201ENST00000374990 PLAC8L1A1L4L8 177 aa13.6□□□□□ -0.23
TGFBR1-201ENST00000374990 SBSPONQ8IVN8 264 aa13.6□□□□□ -0.23
TGFBR1-201ENST00000374990 BRK1Q8WUW1 75 aa13.6□□□□□ -0.23
TGFBR1-201ENST00000374990 Q8N3U1 123 aa13.59□□□□□ -0.23
TGFBR1-201ENST00000374990 REG3GQ6UW15 175 aa13.58□□□□□ -0.24
TGFBR1-201ENST00000374990 Q6ZRU5 148 aa13.58□□□□□ -0.24
TGFBR1-201ENST00000374990 PRYO14603 147 aa13.58□□□□□ -0.24
TGFBR1-201ENST00000374990 V9GYY9 64 aa13.58□□□□□ -0.24
TGFBR1-201ENST00000374990 HECTD1Q9ULT8 2610 aa13.58□□□□□ -0.24
TGFBR1-201ENST00000374990 A8MTW9 85 aa13.57□□□□□ -0.24
TGFBR1-201ENST00000374990 SOSTDC1Q6X4U4 206 aa13.57□□□□□ -0.24
TGFBR1-201ENST00000374990 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
TGFBR1-201ENST00000374990 MPLKIPQ8TAP9 179 aa13.56□□□□□ -0.24
TGFBR1-201ENST00000374990 X6R8D5 127 aa13.56□□□□□ -0.24
TGFBR1-201ENST00000374990 Q6ZVQ6 151 aa13.55□□□□□ -0.24
TGFBR1-201ENST00000374990 C10orf25Q5T742 122 aa13.54□□□□□ -0.24
TGFBR1-201ENST00000374990 CELA1Q9UNI1 258 aa13.54□□□□□ -0.24
TGFBR1-201ENST00000374990 H3BNG1 76 aa13.54□□□□□ -0.24
TGFBR1-201ENST00000374990 M0R2N4 97 aa13.54□□□□□ -0.24
TGFBR1-201ENST00000374990 MRPL55Q7Z7F7 128 aaKnown RBP13.54□□□□□ -0.24
TGFBR1-201ENST00000374990 LINC01556Q5JQF7 62 aa13.53□□□□□ -0.24
TGFBR1-201ENST00000374990 SMIM26A0A096LP01 95 aa13.52□□□□□ -0.25
TGFBR1-201ENST00000374990 LRCOL1A6NCL2 159 aa13.51□□□□□ -0.25
TGFBR1-201ENST00000374990 HTTP42858 3142 aa13.51□□□□□ -0.25
TGFBR1-201ENST00000374990 CENPEQ02224 2701 aa13.49□□□□□ -0.25
TGFBR1-201ENST00000374990 RANBP2P49792 3224 aaKnown RBP13.49□□□□□ -0.25
TGFBR1-201ENST00000374990 SPINK6Q6UWN8 80 aa13.49□□□□□ -0.25
TGFBR1-201ENST00000374990 LITAFQ99732 161 aa13.48□□□□□ -0.25
TGFBR1-201ENST00000374990 MGAM2Q2M2H8 2515 aa13.48□□□□□ -0.25
TGFBR1-201ENST00000374990 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
TGFBR1-201ENST00000374990 SEC61GP60059 68 aa13.47□□□□□ -0.25
TGFBR1-201ENST00000374990 CXCL6P80162 114 aa13.47□□□□□ -0.25
TGFBR1-201ENST00000374990 CASC2Q6XLA1 102 aa13.46□□□□□ -0.25
TGFBR1-201ENST00000374990 SERP1Q9Y6X1 66 aa13.46□□□□□ -0.25
TGFBR1-201ENST00000374990 IGLV9-49A0A0B4J1Y8 123 aa13.46□□□□□ -0.25
TGFBR1-201ENST00000374990 Q8N9L7 120 aa13.46□□□□□ -0.26
TGFBR1-201ENST00000374990 FAM30AQ9NZY2 134 aa13.46□□□□□ -0.26
TGFBR1-201ENST00000374990 FAM218AQ96MZ4 157 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms