RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DEFB130AP0DP74 79 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
HMGCL-203ENST00000374490 SNCGO76070 127 aa9.73□□□□□ -0.85
HMGCL-203ENST00000374490 GYPEP15421 78 aa9.73□□□□□ -0.85
HMGCL-203ENST00000374490 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
HMGCL-203ENST00000374490 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
HMGCL-203ENST00000374490 RPL28P46779 137 aaKnown RBP9.72□□□□□ -0.85
HMGCL-203ENST00000374490 SS18Q15532 418 aa9.72□□□□□ -0.85
HMGCL-203ENST00000374490 MIR7-3HGQ8N6C7 128 aa9.72□□□□□ -0.85
HMGCL-203ENST00000374490 X6R8D5 127 aa9.72□□□□□ -0.85
HMGCL-203ENST00000374490 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.85
HMGCL-203ENST00000374490 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.85
HMGCL-203ENST00000374490 PKD1L1Q8TDX9 2849 aa9.71□□□□□ -0.86
HMGCL-203ENST00000374490 LINC00158P58513 81 aa9.71□□□□□ -0.86
HMGCL-203ENST00000374490 Q6Q795 121 aa9.71□□□□□ -0.86
HMGCL-203ENST00000374490 ACYP1P07311 99 aa9.7□□□□□ -0.86
HMGCL-203ENST00000374490 APOC4P55056 127 aa9.69□□□□□ -0.86
HMGCL-203ENST00000374490 PAX4O43316 350 aa9.68□□□□□ -0.86
HMGCL-203ENST00000374490 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
HMGCL-203ENST00000374490 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
HMGCL-203ENST00000374490 Q8IZM0 81 aa9.68□□□□□ -0.86
HMGCL-203ENST00000374490 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
HMGCL-203ENST00000374490 C5orf38Q86SI9 138 aa9.67□□□□□ -0.86
HMGCL-203ENST00000374490 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
HMGCL-203ENST00000374490 H0YGX0 51 aa9.67□□□□□ -0.86
HMGCL-203ENST00000374490 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
HMGCL-203ENST00000374490 CXCL5P42830 114 aa9.66□□□□□ -0.86
HMGCL-203ENST00000374490 CCL18P55774 89 aa9.66□□□□□ -0.86
HMGCL-203ENST00000374490 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
HMGCL-203ENST00000374490 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
HMGCL-203ENST00000374490 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
HMGCL-203ENST00000374490 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.86
HMGCL-203ENST00000374490 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
HMGCL-203ENST00000374490 TGP01266 2768 aa9.64□□□□□ -0.87
HMGCL-203ENST00000374490 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
HMGCL-203ENST00000374490 XCL1P47992 114 aa9.64□□□□□ -0.87
HMGCL-203ENST00000374490 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
HMGCL-203ENST00000374490 MIFP14174 115 aa9.63□□□□□ -0.87
HMGCL-203ENST00000374490 DAD1P61803 113 aa9.63□□□□□ -0.87
HMGCL-203ENST00000374490 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
HMGCL-203ENST00000374490 ANAPC13Q9BS18 74 aa9.63□□□□□ -0.87
HMGCL-203ENST00000374490 VWFP04275 2813 aa9.62□□□□□ -0.87
HMGCL-203ENST00000374490 DNAL4O96015 105 aa9.62□□□□□ -0.87
HMGCL-203ENST00000374490 PFN2P35080 140 aa9.62□□□□□ -0.87
HMGCL-203ENST00000374490 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
HMGCL-203ENST00000374490 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
HMGCL-203ENST00000374490 ATP5G1P05496 136 aa9.61□□□□□ -0.87
HMGCL-203ENST00000374490 NOTCH1P46531 2555 aa9.61□□□□□ -0.87
HMGCL-203ENST00000374490 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 MALP21145 153 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 COX17Q14061 63 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 CMYA5Q8N3K9 4069 aa9.6□□□□□ -0.87
HMGCL-203ENST00000374490 TRBV7-7A0A0K0K1E9 115 aa9.59□□□□□ -0.87
HMGCL-203ENST00000374490 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
HMGCL-203ENST00000374490 NDUFC2O95298 119 aa9.58□□□□□ -0.88
HMGCL-203ENST00000374490 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
HMGCL-203ENST00000374490 NDUFV3P56181 108 aaKnown RBP9.58□□□□□ -0.88
HMGCL-203ENST00000374490 KPRPQ5T749 579 aaPredicted RBP9.58□□□□□ -0.88
HMGCL-203ENST00000374490 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
HMGCL-203ENST00000374490 A0A096LPF7 62 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 A0A1B0GX51 115 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 LINC00269Q8N2A0 174 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 Q8NAQ8 132 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 IMUPQ9GZP8 106 aa9.57□□□□□ -0.88
HMGCL-203ENST00000374490 ANGP03950 147 aaKnown RBP9.56□□□□□ -0.88
HMGCL-203ENST00000374490 REG3AQ06141 175 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 LINC00643Q86TS7 51 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
HMGCL-203ENST00000374490 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
HMGCL-203ENST00000374490 KIAA0087Q14695 138 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 LELP1Q5T871 98 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 Q9HAA7 133 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
HMGCL-203ENST00000374490 A0A087WYN8 130 aa9.55□□□□□ -0.88
HMGCL-203ENST00000374490 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
HMGCL-203ENST00000374490 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
HMGCL-203ENST00000374490 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
HMGCL-203ENST00000374490 DEFB4AO15263 64 aa9.53□□□□□ -0.88
HMGCL-203ENST00000374490 LECT2O14960 151 aa9.52□□□□□ -0.89
HMGCL-203ENST00000374490 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.89
HMGCL-203ENST00000374490 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
HMGCL-203ENST00000374490 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
HMGCL-203ENST00000374490 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
HMGCL-203ENST00000374490 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
HMGCL-203ENST00000374490 ORMDL1Q9P0S3 153 aa9.51□□□□□ -0.89
HMGCL-203ENST00000374490 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
HMGCL-203ENST00000374490 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
HMGCL-203ENST00000374490 GAGE2AQ6NT46 116 aa9.49□□□□□ -0.89
HMGCL-203ENST00000374490 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
HMGCL-203ENST00000374490 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
HMGCL-203ENST00000374490 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms