RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
LMX1B-202ENST00000373474 IGHV6-1A0A0B4J1U7 121 aa10.13□□□□□ -0.79
LMX1B-202ENST00000373474 IGLV1-51P01701 117 aa10.13□□□□□ -0.79
LMX1B-202ENST00000373474 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
LMX1B-202ENST00000373474 UNQ6190/PRO20217Q6UXQ8 127 aa10.13□□□□□ -0.79
LMX1B-202ENST00000373474 PLXNB1O43157 2135 aa10.12□□□□□ -0.79
LMX1B-202ENST00000373474 A0A1W2PPR1 153 aa10.12□□□□□ -0.79
LMX1B-202ENST00000373474 PRR14LQ5THK1 2151 aa10.12□□□□□ -0.79
LMX1B-202ENST00000373474 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
LMX1B-202ENST00000373474 C16orf95Q9H693 158 aa10.1□□□□□ -0.79
LMX1B-202ENST00000373474 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
LMX1B-202ENST00000373474 LINC01561Q8N1V8 128 aa10.09□□□□□ -0.79
LMX1B-202ENST00000373474 C1orf64Q8NEQ6 169 aa10.09□□□□□ -0.79
LMX1B-202ENST00000373474 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
LMX1B-202ENST00000373474 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
LMX1B-202ENST00000373474 PRR3P79522 188 aaKnown RBP10.08□□□□□ -0.8
LMX1B-202ENST00000373474 A0A1B0GU69 56 aa10.07□□□□□ -0.8
LMX1B-202ENST00000373474 Q9BRP9 147 aa10.07□□□□□ -0.8
LMX1B-202ENST00000373474 KRTAP10-9P60411 292 aa10.06□□□□□ -0.8
LMX1B-202ENST00000373474 A0A087WSZ3 146 aa10.05□□□□□ -0.8
LMX1B-202ENST00000373474 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
LMX1B-202ENST00000373474 FAM19A4Q96LR4 140 aa10.05□□□□□ -0.8
LMX1B-202ENST00000373474 SPINK1P00995 79 aa10.04□□□□□ -0.8
LMX1B-202ENST00000373474 C8orf87E5RJ46 101 aa10.04□□□□□ -0.8
LMX1B-202ENST00000373474 X6R8D5 127 aa10.04□□□□□ -0.8
LMX1B-202ENST00000373474 COL4A2P08572 1712 aa10.03□□□□□ -0.8
LMX1B-202ENST00000373474 H3BPC8 53 aa10.03□□□□□ -0.8
LMX1B-202ENST00000373474 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
LMX1B-202ENST00000373474 A0A1B0GW54 56 aa10.02□□□□□ -0.81
LMX1B-202ENST00000373474 CIRBP-AS1Q8TBR5 109 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 ARHGAP32A7KAX9 2087 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 ACYP2P14621 99 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 PLA2G2AP14555 144 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
LMX1B-202ENST00000373474 LINC00315P59091 139 aa10□□□□□ -0.81
LMX1B-202ENST00000373474 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
LMX1B-202ENST00000373474 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
LMX1B-202ENST00000373474 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
LMX1B-202ENST00000373474 Q6ZTC4 211 aa9.99□□□□□ -0.81
LMX1B-202ENST00000373474 NAV3Q8IVL0 2385 aa9.99□□□□□ -0.81
LMX1B-202ENST00000373474 SMR3AQ99954 134 aa9.99□□□□□ -0.81
LMX1B-202ENST00000373474 MUC6Q6W4X9 2439 aa9.98□□□□□ -0.81
LMX1B-202ENST00000373474 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
LMX1B-202ENST00000373474 EP400Q96L91 3159 aa9.97□□□□□ -0.81
LMX1B-202ENST00000373474 M0R2N4 97 aa9.97□□□□□ -0.81
LMX1B-202ENST00000373474 RETNLBQ9BQ08 111 aa9.97□□□□□ -0.81
LMX1B-202ENST00000373474 Q8N2B8 174 aa9.96□□□□□ -0.82
LMX1B-202ENST00000373474 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
LMX1B-202ENST00000373474 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
LMX1B-202ENST00000373474 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
LMX1B-202ENST00000373474 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
LMX1B-202ENST00000373474 DEFB116Q30KQ4 102 aa9.94□□□□□ -0.82
LMX1B-202ENST00000373474 PRO0461Q9UI25 63 aa9.94□□□□□ -0.82
LMX1B-202ENST00000373474 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
LMX1B-202ENST00000373474 Q9UF83 564 aa9.94□□□□□ -0.82
LMX1B-202ENST00000373474 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
LMX1B-202ENST00000373474 ATP11AUNQ6ZP68 121 aa9.92□□□□□ -0.82
LMX1B-202ENST00000373474 FAM208BQ5VWN6 2430 aa9.92□□□□□ -0.82
LMX1B-202ENST00000373474 IGLV5-45A0A087WSX0 123 aa9.91□□□□□ -0.82
LMX1B-202ENST00000373474 SPINT4Q6UDR6 99 aa9.9□□□□□ -0.82
LMX1B-202ENST00000373474 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
LMX1B-202ENST00000373474 CYP4F30PQ9H0H9 118 aa9.9□□□□□ -0.83
LMX1B-202ENST00000373474 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.83
LMX1B-202ENST00000373474 A8MTW9 85 aa9.9□□□□□ -0.83
LMX1B-202ENST00000373474 LOC110117498A0A087WWA1 95 aa9.89□□□□□ -0.83
LMX1B-202ENST00000373474 Q6ZRU5 148 aa9.89□□□□□ -0.83
LMX1B-202ENST00000373474 PTPRBP23467 1997 aa9.88□□□□□ -0.83
LMX1B-202ENST00000373474 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
LMX1B-202ENST00000373474 NUPR2A6NF83 97 aa9.88□□□□□ -0.83
LMX1B-202ENST00000373474 PRLHP81277 87 aa9.88□□□□□ -0.83
LMX1B-202ENST00000373474 KIAA0087Q14695 138 aa9.87□□□□□ -0.83
LMX1B-202ENST00000373474 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
LMX1B-202ENST00000373474 SRCAPQ6ZRS2 3230 aa9.87□□□□□ -0.83
LMX1B-202ENST00000373474 PTPRQQ9UMZ3 2332 aa9.86□□□□□ -0.83
LMX1B-202ENST00000373474 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
LMX1B-202ENST00000373474 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
LMX1B-202ENST00000373474 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
LMX1B-202ENST00000373474 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
LMX1B-202ENST00000373474 Q6ZQT0 140 aa9.85□□□□□ -0.83
LMX1B-202ENST00000373474 CD164Q04900 197 aa9.85□□□□□ -0.83
LMX1B-202ENST00000373474 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
LMX1B-202ENST00000373474 LY6G6CO95867 125 aa9.84□□□□□ -0.83
LMX1B-202ENST00000373474 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
LMX1B-202ENST00000373474 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
LMX1B-202ENST00000373474 PCSK5Q92824 1860 aa9.83□□□□□ -0.84
LMX1B-202ENST00000373474 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
LMX1B-202ENST00000373474 TRAV22A0A0B4J277 110 aa9.81□□□□□ -0.84
LMX1B-202ENST00000373474 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
LMX1B-202ENST00000373474 FHL3Q13643 280 aa9.8□□□□□ -0.84
LMX1B-202ENST00000373474 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
LMX1B-202ENST00000373474 AGRNO00468 2067 aa9.79□□□□□ -0.84
LMX1B-202ENST00000373474 ELOF1P60002 83 aaKnown RBP9.78□□□□□ -0.84
LMX1B-202ENST00000373474 Q8NBF4 154 aa9.78□□□□□ -0.84
LMX1B-202ENST00000373474 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
LMX1B-202ENST00000373474 FSHBP01225 129 aa9.77□□□□□ -0.85
LMX1B-202ENST00000373474 SPG11Q96JI7 2443 aa9.76□□□□□ -0.85
LMX1B-202ENST00000373474 LITAFQ99732 161 aa9.75□□□□□ -0.85
LMX1B-202ENST00000373474 PRRC2AP48634 2157 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms