RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SS18L2Q9UHA2 77 aa8.82□□□□□ -1
CTPS1-202ENST00000372621 Q8IZM0 81 aa8.82□□□□□ -1
CTPS1-202ENST00000372621 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
CTPS1-202ENST00000372621 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
CTPS1-202ENST00000372621 C9orf129Q5T035 196 aaKnown RBP8.81□□□□□ -1
CTPS1-202ENST00000372621 XCL1P47992 114 aa8.81□□□□□ -1
CTPS1-202ENST00000372621 LINC01561Q8N1V8 128 aa8.81□□□□□ -1
CTPS1-202ENST00000372621 FN1P02751 2386 aaKnown RBP8.81□□□□□ -1
CTPS1-202ENST00000372621 SS18Q15532 418 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 LINC00482Q8N8I6 264 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 ITPR2Q14571 2701 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 PAX4O43316 350 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 DNAL4O96015 105 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 PRO0255Q9UI72 69 aa8.8□□□□□ -1
CTPS1-202ENST00000372621 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
CTPS1-202ENST00000372621 ATP5G1P05496 136 aa8.79□□□□□ -1
CTPS1-202ENST00000372621 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
CTPS1-202ENST00000372621 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
CTPS1-202ENST00000372621 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
CTPS1-202ENST00000372621 FAM236AA0A1B0GUQ0 79 aa8.78□□□□□ -1
CTPS1-202ENST00000372621 FAM236BA0A1B0GV22 79 aa8.78□□□□□ -1
CTPS1-202ENST00000372621 LECT2O14960 151 aa8.78□□□□□ -1
CTPS1-202ENST00000372621 CXCL5P42830 114 aa8.77□□□□□ -1.01
CTPS1-202ENST00000372621 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
CTPS1-202ENST00000372621 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
CTPS1-202ENST00000372621 A0A096LPF7 62 aa8.76□□□□□ -1.01
CTPS1-202ENST00000372621 NANOS2P60321 138 aaKnown RBP8.76□□□□□ -1.01
CTPS1-202ENST00000372621 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
CTPS1-202ENST00000372621 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
CTPS1-202ENST00000372621 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
CTPS1-202ENST00000372621 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
CTPS1-202ENST00000372621 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
CTPS1-202ENST00000372621 CD164L2Q6UWJ8 174 aa8.75□□□□□ -1.01
CTPS1-202ENST00000372621 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
CTPS1-202ENST00000372621 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
CTPS1-202ENST00000372621 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
CTPS1-202ENST00000372621 VWFP04275 2813 aa8.74□□□□□ -1.01
CTPS1-202ENST00000372621 COX17Q14061 63 aa8.74□□□□□ -1.01
CTPS1-202ENST00000372621 IGHV4-28A0A0C4DH34 117 aa8.73□□□□□ -1.01
CTPS1-202ENST00000372621 NDUFC2O95298 119 aa8.73□□□□□ -1.01
CTPS1-202ENST00000372621 SLPIP03973 132 aa8.73□□□□□ -1.01
CTPS1-202ENST00000372621 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
CTPS1-202ENST00000372621 Q8N3U1 123 aa8.73□□□□□ -1.01
CTPS1-202ENST00000372621 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
CTPS1-202ENST00000372621 SMR3AQ99954 134 aa8.73□□□□□ -1.01
CTPS1-202ENST00000372621 NCR3O14931 201 aa8.72□□□□□ -1.01
CTPS1-202ENST00000372621 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
CTPS1-202ENST00000372621 A0A1B0GX51 115 aa8.71□□□□□ -1.01
CTPS1-202ENST00000372621 HIST1H4AP62805 103 aaKnown RBP8.71□□□□□ -1.01
CTPS1-202ENST00000372621 LINC00846Q9NV44 126 aa8.71□□□□□ -1.02
CTPS1-202ENST00000372621 UNC79Q9P2D8 2635 aa8.71□□□□□ -1.02
CTPS1-202ENST00000372621 REG3AQ06141 175 aa8.71□□□□□ -1.02
CTPS1-202ENST00000372621 DEFB4AO15263 64 aa8.7□□□□□ -1.02
CTPS1-202ENST00000372621 Q8N814 137 aa8.7□□□□□ -1.02
CTPS1-202ENST00000372621 HIVEP2P31629 2446 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 ANGP03950 147 aaKnown RBP8.69□□□□□ -1.02
CTPS1-202ENST00000372621 DEFB135Q30KP9 77 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 Q8NDZ9 215 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
CTPS1-202ENST00000372621 C9orf66Q5T8R8 295 aa8.69□□□□□ -1.02
CTPS1-202ENST00000372621 Q6JHZ5 121 aa8.68□□□□□ -1.02
CTPS1-202ENST00000372621 C3orf22Q8N5N4 141 aa8.68□□□□□ -1.02
CTPS1-202ENST00000372621 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
CTPS1-202ENST00000372621 CCKP06307 115 aa8.67□□□□□ -1.02
CTPS1-202ENST00000372621 Q8NAQ8 132 aa8.67□□□□□ -1.02
CTPS1-202ENST00000372621 UQCRQO14949 82 aa8.66□□□□□ -1.02
CTPS1-202ENST00000372621 DAD1P61803 113 aa8.66□□□□□ -1.02
CTPS1-202ENST00000372621 HELZ2Q9BYK8 2649 aaKnown RBP8.65□□□□□ -1.02
CTPS1-202ENST00000372621 APOC4P55056 127 aa8.65□□□□□ -1.02
CTPS1-202ENST00000372621 TMEM256-PLSCR3K7ERE1 68 aa8.65□□□□□ -1.02
CTPS1-202ENST00000372621 LINC00526Q96FQ7 95 aa8.65□□□□□ -1.02
CTPS1-202ENST00000372621 C2orf48Q96LS8 159 aa8.65□□□□□ -1.02
CTPS1-202ENST00000372621 JMJD7-PLA2G4BH0Y9G9 81 aa8.65□□□□□ -1.03
CTPS1-202ENST00000372621 C10orf25Q5T742 122 aa8.64□□□□□ -1.03
CTPS1-202ENST00000372621 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
CTPS1-202ENST00000372621 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
CTPS1-202ENST00000372621 IGKV3D-7A0A0C4DH55 119 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 J3QKU1 62 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 MIFP14174 115 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 COX7CP15954 63 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 C6orf99Q4VX62 202 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 LELP1Q5T871 98 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
CTPS1-202ENST00000372621 ATOX1O00244 68 aa8.62□□□□□ -1.03
CTPS1-202ENST00000372621 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
CTPS1-202ENST00000372621 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
CTPS1-202ENST00000372621 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
CTPS1-202ENST00000372621 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
CTPS1-202ENST00000372621 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
CTPS1-202ENST00000372621 CYSRT1A8MQ03 144 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms