RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
NDC1-201ENST00000371429 MGAM2Q2M2H8 2515 aa10.43□□□□□ -0.74
NDC1-201ENST00000371429 CASC2Q6XLA1 102 aa10.43□□□□□ -0.74
NDC1-201ENST00000371429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.42□□□□□ -0.74
NDC1-201ENST00000371429 TRBV10-3A0A0K0K1G6 114 aa10.41□□□□□ -0.74
NDC1-201ENST00000371429 SDIM1Q6ZPB5 146 aa10.41□□□□□ -0.74
NDC1-201ENST00000371429 USP24Q9UPU5 2620 aa10.41□□□□□ -0.74
NDC1-201ENST00000371429 C2orf91Q6ZV80 131 aa10.4□□□□□ -0.74
NDC1-201ENST00000371429 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
NDC1-201ENST00000371429 AMELXQ99217 191 aa10.4□□□□□ -0.74
NDC1-201ENST00000371429 NDUFC2-KCTD14E9PQ53 114 aa10.4□□□□□ -0.74
NDC1-201ENST00000371429 LST1O00453 97 aa10.4□□□□□ -0.74
NDC1-201ENST00000371429 ENHOQ6UWT2 76 aa10.4□□□□□ -0.75
NDC1-201ENST00000371429 ATP5EP2Q5VTU8 51 aa10.39□□□□□ -0.75
NDC1-201ENST00000371429 C11orf72Q8NBR9 251 aa10.39□□□□□ -0.75
NDC1-201ENST00000371429 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
NDC1-201ENST00000371429 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 FSHBP01225 129 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 SEC61GP60059 68 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 PTPRBP23467 1997 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 MDFIQ99750 246 aa10.38□□□□□ -0.75
NDC1-201ENST00000371429 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
NDC1-201ENST00000371429 F8WDY8 70 aa10.37□□□□□ -0.75
NDC1-201ENST00000371429 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
NDC1-201ENST00000371429 PRR3P79522 188 aaKnown RBP10.37□□□□□ -0.75
NDC1-201ENST00000371429 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
NDC1-201ENST00000371429 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
NDC1-201ENST00000371429 LINC00310P59036 64 aa10.36□□□□□ -0.75
NDC1-201ENST00000371429 WFDC13Q8IUB5 93 aa10.35□□□□□ -0.75
NDC1-201ENST00000371429 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
NDC1-201ENST00000371429 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
NDC1-201ENST00000371429 TSPEAR-AS2P59090 65 aa10.33□□□□□ -0.76
NDC1-201ENST00000371429 ESRGQ1W209 222 aa10.33□□□□□ -0.76
NDC1-201ENST00000371429 MUC4Q99102 2169 aa10.33□□□□□ -0.76
NDC1-201ENST00000371429 Q6ZRU5 148 aa10.33□□□□□ -0.76
NDC1-201ENST00000371429 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
NDC1-201ENST00000371429 C20orf197Q8N268 126 aa10.32□□□□□ -0.76
NDC1-201ENST00000371429 MAST4O15021 2626 aa10.31□□□□□ -0.76
NDC1-201ENST00000371429 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
NDC1-201ENST00000371429 X6R8D5 127 aa10.3□□□□□ -0.76
NDC1-201ENST00000371429 LINC01561Q8N1V8 128 aa10.3□□□□□ -0.76
NDC1-201ENST00000371429 DNAH12Q6ZR08 3092 aa10.3□□□□□ -0.76
NDC1-201ENST00000371429 A0A096LNJ9 63 aa10.3□□□□□ -0.76
NDC1-201ENST00000371429 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
NDC1-201ENST00000371429 UTRNP46939 3433 aa10.29□□□□□ -0.76
NDC1-201ENST00000371429 ATRQ13535 2644 aa10.29□□□□□ -0.76
NDC1-201ENST00000371429 Q8N814 137 aa10.28□□□□□ -0.76
NDC1-201ENST00000371429 MT-ATP8P03928 68 aa10.28□□□□□ -0.76
NDC1-201ENST00000371429 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
NDC1-201ENST00000371429 NDUFC2O95298 119 aa10.27□□□□□ -0.77
NDC1-201ENST00000371429 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
NDC1-201ENST00000371429 PRYO14603 147 aa10.26□□□□□ -0.77
NDC1-201ENST00000371429 H3BNG1 76 aa10.25□□□□□ -0.77
NDC1-201ENST00000371429 Q9BRP9 147 aa10.25□□□□□ -0.77
NDC1-201ENST00000371429 Q6JHZ5 121 aa10.24□□□□□ -0.77
NDC1-201ENST00000371429 LINC00315P59091 139 aa10.23□□□□□ -0.77
NDC1-201ENST00000371429 CEP350Q5VT06 3117 aa10.23□□□□□ -0.77
NDC1-201ENST00000371429 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
NDC1-201ENST00000371429 C3orf22Q8N5N4 141 aa10.23□□□□□ -0.77
NDC1-201ENST00000371429 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
NDC1-201ENST00000371429 PCSK5Q92824 1860 aa10.22□□□□□ -0.77
NDC1-201ENST00000371429 COL27A1Q8IZC6 1860 aaPredicted RBP10.22□□□□□ -0.77
NDC1-201ENST00000371429 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
NDC1-201ENST00000371429 PRLHP81277 87 aa10.22□□□□□ -0.77
NDC1-201ENST00000371429 A0A087WYN8 130 aa10.21□□□□□ -0.77
NDC1-201ENST00000371429 Q8NAQ8 132 aa10.21□□□□□ -0.77
NDC1-201ENST00000371429 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
NDC1-201ENST00000371429 UQCRQO14949 82 aa10.2□□□□□ -0.78
NDC1-201ENST00000371429 J3KT08 172 aa10.19□□□□□ -0.78
NDC1-201ENST00000371429 Q8N9L7 120 aa10.18□□□□□ -0.78
NDC1-201ENST00000371429 A8MTW9 85 aa10.18□□□□□ -0.78
NDC1-201ENST00000371429 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
NDC1-201ENST00000371429 A0A087WSZ3 146 aa10.17□□□□□ -0.78
NDC1-201ENST00000371429 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
NDC1-201ENST00000371429 Q9UF83 564 aa10.17□□□□□ -0.78
NDC1-201ENST00000371429 A0A096LNT2 108 aa10.16□□□□□ -0.78
NDC1-201ENST00000371429 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
NDC1-201ENST00000371429 KLK9Q2XQG4 91 aa10.16□□□□□ -0.78
NDC1-201ENST00000371429 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
NDC1-201ENST00000371429 IMUPQ9GZP8 106 aa10.15□□□□□ -0.78
NDC1-201ENST00000371429 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
NDC1-201ENST00000371429 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
NDC1-201ENST00000371429 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
NDC1-201ENST00000371429 FLNAP21333 2647 aaKnown RBP10.13□□□□□ -0.79
NDC1-201ENST00000371429 FAM236DA0A1B0GTK5 79 aa10.13□□□□□ -0.79
NDC1-201ENST00000371429 FAM236CP0DP71 79 aa10.13□□□□□ -0.79
NDC1-201ENST00000371429 C6orf48Q9UBA6 75 aa10.13□□□□□ -0.79
NDC1-201ENST00000371429 FAM30AQ9NZY2 134 aa10.12□□□□□ -0.79
NDC1-201ENST00000371429 SERP2Q8N6R1 65 aa10.12□□□□□ -0.79
NDC1-201ENST00000371429 LINC00167Q96N53 147 aa10.12□□□□□ -0.79
NDC1-201ENST00000371429 CENPEQ02224 2701 aa10.11□□□□□ -0.79
NDC1-201ENST00000371429 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
NDC1-201ENST00000371429 PRR4Q16378 134 aa10.11□□□□□ -0.79
NDC1-201ENST00000371429 Q8N3U1 123 aa10.11□□□□□ -0.79
NDC1-201ENST00000371429 CFAP46Q8IYW2 2715 aa10.1□□□□□ -0.79
NDC1-201ENST00000371429 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
NDC1-201ENST00000371429 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
NDC1-201ENST00000371429 Q6ZVQ6 151 aa10.1□□□□□ -0.79
NDC1-201ENST00000371429 ITPR3Q14573 2671 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 665 ms