RNA–Protein interactions for RNA: ENST00000371357.5

CACNA1B-204, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1B, Length 9,642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-204ENST00000371357 PCOTHQ58A44 107 aa13.36□□□□□ -0.27
CACNA1B-204ENST00000371357 SBSPONQ8IVN8 264 aa13.35□□□□□ -0.27
CACNA1B-204ENST00000371357 ADAMTSL4-AS1Q5T5F5 129 aa13.34□□□□□ -0.27
CACNA1B-204ENST00000371357 C6orf48Q9UBA6 75 aa13.33□□□□□ -0.27
CACNA1B-204ENST00000371357 WIPF1O43516 503 aa13.33□□□□□ -0.28
CACNA1B-204ENST00000371357 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
CACNA1B-204ENST00000371357 SMIM1B2RUZ4 78 aa13.32□□□□□ -0.28
CACNA1B-204ENST00000371357 K7EQG2 157 aa13.32□□□□□ -0.28
CACNA1B-204ENST00000371357 DEFB1P60022 68 aa13.32□□□□□ -0.28
CACNA1B-204ENST00000371357 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
CACNA1B-204ENST00000371357 KPRPQ5T749 579 aaPredicted RBP13.31□□□□□ -0.28
CACNA1B-204ENST00000371357 PRO0461Q9UI25 63 aa13.31□□□□□ -0.28
CACNA1B-204ENST00000371357 LINC01546A6NGU7 62 aa13.31□□□□□ -0.28
CACNA1B-204ENST00000371357 A6NDX4 124 aa13.31□□□□□ -0.28
CACNA1B-204ENST00000371357 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
CACNA1B-204ENST00000371357 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
CACNA1B-204ENST00000371357 IGFL2Q6UWQ7 119 aa13.3□□□□□ -0.28
CACNA1B-204ENST00000371357 LINC00959A0A1B0GUT2 108 aa13.3□□□□□ -0.28
CACNA1B-204ENST00000371357 FAM19A4Q96LR4 140 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 AMELXQ99217 191 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 ZNF702PQ9H963 129 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 ODF3BA8MYP8 253 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 IGLV9-49A0A0B4J1Y8 123 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 CDC42SE2Q9NRR3 84 aa13.29□□□□□ -0.28
CACNA1B-204ENST00000371357 LCA10Q71F78 164 aa13.28□□□□□ -0.28
CACNA1B-204ENST00000371357 LOC110117498A0A087WWA1 95 aa13.28□□□□□ -0.28
CACNA1B-204ENST00000371357 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
CACNA1B-204ENST00000371357 DEFB113Q30KQ7 82 aa13.28□□□□□ -0.28
CACNA1B-204ENST00000371357 LINC01548A6NM66 108 aa13.27□□□□□ -0.28
CACNA1B-204ENST00000371357 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.28
CACNA1B-204ENST00000371357 SMIM29Q86T20 159 aa13.27□□□□□ -0.28
CACNA1B-204ENST00000371357 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.29
CACNA1B-204ENST00000371357 COL4A3Q01955 1670 aa13.27□□□□□ -0.29
CACNA1B-204ENST00000371357 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
CACNA1B-204ENST00000371357 DAZAP2Q15038 168 aaPredicted RBP13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 PLA2G2CQ5R387 149 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 X6R8D5 127 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 LY6G6EA0A0G2JKS1 128 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 LELP1Q5T871 98 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 U3KQA8 63 aa13.26□□□□□ -0.29
CACNA1B-204ENST00000371357 MUC22E2RYF6 1773 aaPredicted RBP13.25□□□□□ -0.29
CACNA1B-204ENST00000371357 COL4A4P53420 1690 aaPredicted RBP13.25□□□□□ -0.29
CACNA1B-204ENST00000371357 SPINK1P00995 79 aa13.25□□□□□ -0.29
CACNA1B-204ENST00000371357 DEFB4AO15263 64 aa13.25□□□□□ -0.29
CACNA1B-204ENST00000371357 TNFRSF13BO14836 293 aaPredicted RBP13.25□□□□□ -0.29
CACNA1B-204ENST00000371357 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
CACNA1B-204ENST00000371357 BRWD1-AS2P59051 145 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 J3QKU1 62 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 PIP4P1Q86T03 277 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 FBXL19-AS1Q494R0 122 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 URB1-AS1Q96HZ7 61 aa13.23□□□□□ -0.29
CACNA1B-204ENST00000371357 LINC01561Q8N1V8 128 aa13.22□□□□□ -0.29
CACNA1B-204ENST00000371357 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
CACNA1B-204ENST00000371357 FHL2Q14192 279 aa13.21□□□□□ -0.29
CACNA1B-204ENST00000371357 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
CACNA1B-204ENST00000371357 Q9BRP9 147 aa13.2□□□□□ -0.3
CACNA1B-204ENST00000371357 TRAV22A0A0B4J277 110 aa13.2□□□□□ -0.3
CACNA1B-204ENST00000371357 PRLHP81277 87 aa13.19□□□□□ -0.3
CACNA1B-204ENST00000371357 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
CACNA1B-204ENST00000371357 KLKP1Q107X0 134 aa13.19□□□□□ -0.3
CACNA1B-204ENST00000371357 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
CACNA1B-204ENST00000371357 EDN2P20800 178 aa13.18□□□□□ -0.3
CACNA1B-204ENST00000371357 ELOF1P60002 83 aaKnown RBP13.18□□□□□ -0.3
CACNA1B-204ENST00000371357 Q8N7P7 452 aa13.18□□□□□ -0.3
CACNA1B-204ENST00000371357 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
CACNA1B-204ENST00000371357 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
CACNA1B-204ENST00000371357 Q9UF83 564 aa13.17□□□□□ -0.3
CACNA1B-204ENST00000371357 LINC00482Q8N8I6 264 aa13.16□□□□□ -0.3
CACNA1B-204ENST00000371357 GAS8-AS1O95177 125 aa13.16□□□□□ -0.3
CACNA1B-204ENST00000371357 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
CACNA1B-204ENST00000371357 A0A087WSZ3 146 aa13.16□□□□□ -0.3
CACNA1B-204ENST00000371357 LOC101927531A0A1B0GV80 90 aa13.15□□□□□ -0.3
CACNA1B-204ENST00000371357 UQCR11O14957 56 aa13.15□□□□□ -0.3
CACNA1B-204ENST00000371357 BPTFQ12830 3046 aa13.15□□□□□ -0.3
CACNA1B-204ENST00000371357 PRR9Q5T870 116 aa13.14□□□□□ -0.31
CACNA1B-204ENST00000371357 SMCPP49901 116 aaPredicted RBP13.14□□□□□ -0.31
CACNA1B-204ENST00000371357 Q6ZPA2 131 aa13.14□□□□□ -0.31
CACNA1B-204ENST00000371357 A0A096LNJ9 63 aa13.14□□□□□ -0.31
CACNA1B-204ENST00000371357 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
CACNA1B-204ENST00000371357 Q6ZSV7 163 aa13.13□□□□□ -0.31
CACNA1B-204ENST00000371357 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
CACNA1B-204ENST00000371357 IGLV2-18A0A075B6J9 118 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 C11orf21Q9P2W6 132 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 PROK1P58294 105 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 TM2D3Q9BRN9 247 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 CRIPTQ9P021 101 aa13.11□□□□□ -0.31
CACNA1B-204ENST00000371357 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
CACNA1B-204ENST00000371357 GRNP28799 593 aaKnown RBP13.1□□□□□ -0.31
CACNA1B-204ENST00000371357 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
CACNA1B-204ENST00000371357 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
CACNA1B-204ENST00000371357 Q6ZQT0 140 aa13.09□□□□□ -0.31
CACNA1B-204ENST00000371357 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
CACNA1B-204ENST00000371357 COX6A2Q02221 97 aa13.08□□□□□ -0.32
CACNA1B-204ENST00000371357 AKAP13Q12802 2813 aa13.07□□□□□ -0.32
CACNA1B-204ENST00000371357 PRR3P79522 188 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms