RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
TUBE1-202ENST00000368662 C2orf48Q96LS8 159 aa8.13□□□□□ -1.11
TUBE1-202ENST00000368662 LCE6AA0A183 80 aa8.12□□□□□ -1.11
TUBE1-202ENST00000368662 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
TUBE1-202ENST00000368662 NTN5Q8WTR8 489 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-202ENST00000368662 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
TUBE1-202ENST00000368662 LINC00587B1AMM8 73 aa8.12□□□□□ -1.11
TUBE1-202ENST00000368662 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
TUBE1-202ENST00000368662 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
TUBE1-202ENST00000368662 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
TUBE1-202ENST00000368662 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
TUBE1-202ENST00000368662 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
TUBE1-202ENST00000368662 C2orf82Q6UX34 121 aa8.1□□□□□ -1.11
TUBE1-202ENST00000368662 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
TUBE1-202ENST00000368662 DDTP30046 118 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 LECT2O14960 151 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 TIMM17BO60830 172 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 MEIG1Q5JSS6 88 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
TUBE1-202ENST00000368662 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
TUBE1-202ENST00000368662 COX17Q14061 63 aa8.08□□□□□ -1.12
TUBE1-202ENST00000368662 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
TUBE1-202ENST00000368662 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
TUBE1-202ENST00000368662 WFDC2Q14508 124 aa8.07□□□□□ -1.12
TUBE1-202ENST00000368662 Q6ZVH6 145 aa8.07□□□□□ -1.12
TUBE1-202ENST00000368662 SPANXB1Q9NS25 103 aaPredicted RBP8.07□□□□□ -1.12
TUBE1-202ENST00000368662 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
TUBE1-202ENST00000368662 HYDINQ4G0P3 5121 aa8.07□□□□□ -1.12
TUBE1-202ENST00000368662 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
TUBE1-202ENST00000368662 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
TUBE1-202ENST00000368662 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
TUBE1-202ENST00000368662 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
TUBE1-202ENST00000368662 Q6ZRU5 148 aa8.06□□□□□ -1.12
TUBE1-202ENST00000368662 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
TUBE1-202ENST00000368662 DNAH17Q9UFH2 4485 aa8.06□□□□□ -1.12
TUBE1-202ENST00000368662 A0A087WTM6 91 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 PCP4L1A6NKN8 68 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
TUBE1-202ENST00000368662 TAL2Q16559 108 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 SMIM13P0DJ93 91 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 GCSHP23434 173 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 LINC00158P58513 81 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 COPS9Q8WXC6 57 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 LITAFQ99732 161 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
TUBE1-202ENST00000368662 EREGO14944 169 aa8.04□□□□□ -1.12
TUBE1-202ENST00000368662 HSD52Q0P140 79 aa8.04□□□□□ -1.12
TUBE1-202ENST00000368662 Q8N814 137 aa8.04□□□□□ -1.12
TUBE1-202ENST00000368662 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
TUBE1-202ENST00000368662 PFN2P35080 140 aa8.03□□□□□ -1.12
TUBE1-202ENST00000368662 SLPIP03973 132 aa8.03□□□□□ -1.12
TUBE1-202ENST00000368662 CTAG1AP78358 180 aa8.03□□□□□ -1.12
TUBE1-202ENST00000368662 A0A0U1RRA0 63 aa8.02□□□□□ -1.13
TUBE1-202ENST00000368662 RTL8CO15255 209 aa8.02□□□□□ -1.13
TUBE1-202ENST00000368662 IFITM1P13164 125 aa8.02□□□□□ -1.13
TUBE1-202ENST00000368662 C9orf116Q5BN46 136 aaPredicted RBP8.02□□□□□ -1.13
TUBE1-202ENST00000368662 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
TUBE1-202ENST00000368662 KMT2CQ8NEZ4 4911 aaKnown RBP8.02□□□□□ -1.13
TUBE1-202ENST00000368662 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
TUBE1-202ENST00000368662 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
TUBE1-202ENST00000368662 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
TUBE1-202ENST00000368662 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
TUBE1-202ENST00000368662 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
TUBE1-202ENST00000368662 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
TUBE1-202ENST00000368662 DAND5Q8N907 189 aa8□□□□□ -1.13
TUBE1-202ENST00000368662 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
TUBE1-202ENST00000368662 M0R143 59 aa8□□□□□ -1.13
TUBE1-202ENST00000368662 CEND1Q8N111 149 aa8□□□□□ -1.13
TUBE1-202ENST00000368662 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
TUBE1-202ENST00000368662 TNP2Q05952 138 aa7.99□□□□□ -1.13
TUBE1-202ENST00000368662 LINC00308Q8TCZ7 52 aa7.99□□□□□ -1.13
TUBE1-202ENST00000368662 RYR2Q92736 4967 aa7.99□□□□□ -1.13
TUBE1-202ENST00000368662 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
TUBE1-202ENST00000368662 LOC107984640A0A0U1RRK4 108 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 TMEM238LA0A1B0GVL6 79 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 A6NJY4 79 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
TUBE1-202ENST00000368662 LOC107984156A0A0G2JMH3 177 aa7.97□□□□□ -1.13
TUBE1-202ENST00000368662 ARL17AQ8IVW1 177 aa7.97□□□□□ -1.13
TUBE1-202ENST00000368662 HECTD4Q9Y4D8 3996 aa7.97□□□□□ -1.13
TUBE1-202ENST00000368662 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
TUBE1-202ENST00000368662 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
TUBE1-202ENST00000368662 NPC2P61916 151 aa7.96□□□□□ -1.13
TUBE1-202ENST00000368662 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.13
TUBE1-202ENST00000368662 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.13
TUBE1-202ENST00000368662 Q6ZRP5 223 aa7.96□□□□□ -1.13
TUBE1-202ENST00000368662 FXYD2P54710 66 aa7.94□□□□□ -1.14
TUBE1-202ENST00000368662 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
TUBE1-202ENST00000368662 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
TUBE1-202ENST00000368662 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
TUBE1-202ENST00000368662 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
TUBE1-202ENST00000368662 A4D1N5 150 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms