RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 Q6ZQY7 126 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 LINC00242Q5T6M2 205 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 MTORP42345 2549 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 C16orf90A8MZG2 172 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 CNFNQ9BYD5 112 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 TIMM17BO60830 172 aa7.6□□□□□ -1.19
PTPRK-205ENST00000368213 CHD9Q3L8U1 2897 aa7.6□□□□□ -1.19
PTPRK-205ENST00000368213 F8WDY8 70 aa7.6□□□□□ -1.19
PTPRK-205ENST00000368213 CDPF1Q6NVV7 123 aa7.6□□□□□ -1.19
PTPRK-205ENST00000368213 Q6ZSN1 163 aa7.6□□□□□ -1.19
PTPRK-205ENST00000368213 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
PTPRK-205ENST00000368213 ESRGQ1W209 222 aa7.59□□□□□ -1.19
PTPRK-205ENST00000368213 TEN1Q86WV5 123 aa7.59□□□□□ -1.19
PTPRK-205ENST00000368213 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
PTPRK-205ENST00000368213 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
PTPRK-205ENST00000368213 ANKRD17O75179 2603 aaKnown RBP7.58□□□□□ -1.2
PTPRK-205ENST00000368213 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
PTPRK-205ENST00000368213 PTH2Q96A98 100 aa7.58□□□□□ -1.2
PTPRK-205ENST00000368213 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
PTPRK-205ENST00000368213 ACANP16112 2415 aa7.57□□□□□ -1.2
PTPRK-205ENST00000368213 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
PTPRK-205ENST00000368213 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
PTPRK-205ENST00000368213 XGP55808 180 aa7.56□□□□□ -1.2
PTPRK-205ENST00000368213 NBDYA0A0U1RRE5 68 aa7.55□□□□□ -1.2
PTPRK-205ENST00000368213 IGIPA6NJ69 53 aa7.55□□□□□ -1.2
PTPRK-205ENST00000368213 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
PTPRK-205ENST00000368213 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
PTPRK-205ENST00000368213 SMIM11BQ8TCY0 68 aa7.55□□□□□ -1.2
PTPRK-205ENST00000368213 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
PTPRK-205ENST00000368213 X6R8D5 127 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 LINC00315P59091 139 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 WFDC2Q14508 124 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 TRIOO75962 3097 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 TRIAP1O43715 76 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-205ENST00000368213 Q6ZRU5 148 aa7.54□□□□□ -1.2
PTPRK-205ENST00000368213 H3BNG1 76 aa7.53□□□□□ -1.2
PTPRK-205ENST00000368213 K7EIL1 84 aa7.53□□□□□ -1.2
PTPRK-205ENST00000368213 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
PTPRK-205ENST00000368213 V9GYY9 64 aa7.53□□□□□ -1.2
PTPRK-205ENST00000368213 SMIM20Q8N5G0 67 aa7.52□□□□□ -1.21
PTPRK-205ENST00000368213 LST1O00453 97 aa7.52□□□□□ -1.21
PTPRK-205ENST00000368213 TEX49A0A1B0GTD5 131 aa7.52□□□□□ -1.21
PTPRK-205ENST00000368213 J3QL48 77 aa7.52□□□□□ -1.21
PTPRK-205ENST00000368213 XIRP2A4UGR9 3374 aa7.51□□□□□ -1.21
PTPRK-205ENST00000368213 ATOX1O00244 68 aa7.51□□□□□ -1.21
PTPRK-205ENST00000368213 RTL8CO15255 209 aa7.51□□□□□ -1.21
PTPRK-205ENST00000368213 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
PTPRK-205ENST00000368213 COX8CQ7Z4L0 72 aa7.51□□□□□ -1.21
PTPRK-205ENST00000368213 TAX1BP3O14907 124 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 AGRNO00468 2067 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 NDUFV3P56181 108 aaKnown RBP7.5□□□□□ -1.21
PTPRK-205ENST00000368213 PRYO14603 147 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 Q8NAQ8 132 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 Q9BRP9 147 aa7.5□□□□□ -1.21
PTPRK-205ENST00000368213 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
PTPRK-205ENST00000368213 FAM236AA0A1B0GUQ0 79 aa7.49□□□□□ -1.21
PTPRK-205ENST00000368213 FAM236BA0A1B0GV22 79 aa7.49□□□□□ -1.21
PTPRK-205ENST00000368213 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
PTPRK-205ENST00000368213 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
PTPRK-205ENST00000368213 KRTAP10-11P60412 298 aa7.49□□□□□ -1.21
PTPRK-205ENST00000368213 COL27A1Q8IZC6 1860 aaPredicted RBP7.49□□□□□ -1.21
PTPRK-205ENST00000368213 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
PTPRK-205ENST00000368213 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
PTPRK-205ENST00000368213 CDH23Q9H251 3354 aa7.48□□□□□ -1.21
PTPRK-205ENST00000368213 PRLHP81277 87 aa7.48□□□□□ -1.21
PTPRK-205ENST00000368213 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
PTPRK-205ENST00000368213 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 A0A096LNT2 108 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 AMELXQ99217 191 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 PCSK5Q92824 1860 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 Q6JHZ5 121 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
PTPRK-205ENST00000368213 PRR15LQ9BU68 103 aa7.46□□□□□ -1.21
PTPRK-205ENST00000368213 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
PTPRK-205ENST00000368213 ENHOQ6UWT2 76 aa7.46□□□□□ -1.22
PTPRK-205ENST00000368213 TRANK1O15050 2925 aa7.45□□□□□ -1.22
PTPRK-205ENST00000368213 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
PTPRK-205ENST00000368213 SDIM1Q6ZPB5 146 aa7.44□□□□□ -1.22
PTPRK-205ENST00000368213 J3KT08 172 aa7.44□□□□□ -1.22
PTPRK-205ENST00000368213 ATP5EP2Q5VTU8 51 aa7.43□□□□□ -1.22
PTPRK-205ENST00000368213 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
PTPRK-205ENST00000368213 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
PTPRK-205ENST00000368213 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
PTPRK-205ENST00000368213 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
PTPRK-205ENST00000368213 WDFY4Q6ZS81 3184 aa7.42□□□□□ -1.22
PTPRK-205ENST00000368213 Q6ZVQ6 151 aa7.42□□□□□ -1.22
PTPRK-205ENST00000368213 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
PTPRK-205ENST00000368213 Q6ZRP5 223 aa7.41□□□□□ -1.22
PTPRK-205ENST00000368213 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
PTPRK-205ENST00000368213 Q8N814 137 aa7.41□□□□□ -1.22
PTPRK-205ENST00000368213 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.22
PTPRK-205ENST00000368213 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.22
PTPRK-205ENST00000368213 CENPEQ02224 2701 aa7.4□□□□□ -1.22
PTPRK-205ENST00000368213 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
PTPRK-205ENST00000368213 SPACA4Q8TDM5 124 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms