RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
RC3H1-202ENST00000367694 ROS1P08922 2347 aa3.38□□□□□ -1.87
RC3H1-202ENST00000367694 PKD1L1Q8TDX9 2849 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 CGB3P0DN86 165 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 CGB7P0DN87 165 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 TMEM167AQ8TBQ9 72 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 C8orf49Q96NF6 230 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 S4R3C0 116 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 COL27A1Q8IZC6 1860 aaPredicted RBP3.37□□□□□ -1.87
RC3H1-202ENST00000367694 IGHV4OR15-8A0A075B7B6 117 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 A0A087WW49 117 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 C9orf66Q5T8R8 295 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 ABCA1O95477 2261 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 IGKV3D-20A0A0C4DH25 116 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 B4DSR2 109 aa3.37□□□□□ -1.87
RC3H1-202ENST00000367694 SUMO2P61956 95 aaKnown RBP3.37□□□□□ -1.87
RC3H1-202ENST00000367694 CNBPP62633 177 aaKnown RBP3.37□□□□□ -1.87
RC3H1-202ENST00000367694 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
RC3H1-202ENST00000367694 PRB4P10163 310 aaPredicted RBP3.36□□□□□ -1.87
RC3H1-202ENST00000367694 ATP1A1-AS1Q5TC04 95 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 GAFA1Q96PS6 74 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 IGHV3-72A0A0B4J1Y9 119 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 CCL3L1P16619 93 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 IGLV1-44P01699 117 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 MYO15AQ9UKN7 3530 aa3.36□□□□□ -1.87
RC3H1-202ENST00000367694 H0YGX0 51 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 Q8N3U1 123 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 B9D2Q9BPU9 175 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 POLR2KP53803 58 aaKnown RBP3.35□□□□□ -1.87
RC3H1-202ENST00000367694 Q8N814 137 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
RC3H1-202ENST00000367694 NDUFA1O15239 70 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 DEFB114Q30KQ6 69 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 LINC00308Q8TCZ7 52 aa3.35□□□□□ -1.87
RC3H1-202ENST00000367694 MAP1AP78559 2803 aaPredicted RBP3.34□□□□□ -1.87
RC3H1-202ENST00000367694 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 CHKB-CPT1BH3BT56 60 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 IGHV1-46P01743 117 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 PDE6GP18545 87 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 Q6ZQT0 140 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 MIR7-3HGQ8N6C7 128 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 IGLV5-45A0A087WSX0 123 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 LINC00476Q8WZB0 136 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 SMR3AQ99954 134 aa3.34□□□□□ -1.87
RC3H1-202ENST00000367694 PLXNB1O43157 2135 aa3.34□□□□□ -1.88
RC3H1-202ENST00000367694 BPY2O14599 106 aa3.34□□□□□ -1.88
RC3H1-202ENST00000367694 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 A0A087WYN8 130 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 IGLV2-23P01705 113 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 LINC00528Q8N1L1 170 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
RC3H1-202ENST00000367694 C22orf34Q6ZV56 151 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 ZFHX4Q86UP3 3567 aa3.33□□□□□ -1.88
RC3H1-202ENST00000367694 IGFL4Q6B9Z1 124 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 BOD1L1Q8NFC6 3051 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 A0A1W2PNU3 283 aaPredicted RBP3.32□□□□□ -1.88
RC3H1-202ENST00000367694 H3BRN7 92 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 C9orf47Q6ZRZ4 202 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 C20orf203Q8NBC4 194 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 FDCSPQ8NFU4 85 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 WNK2Q9Y3S1 2297 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 IGKV2-40A0A087WW87 121 aaPredicted RBP3.32□□□□□ -1.88
RC3H1-202ENST00000367694 NCR3O14931 201 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 IGKV2D-40P01614 121 aaPredicted RBP3.32□□□□□ -1.88
RC3H1-202ENST00000367694 ROMO1P60602 79 aa3.32□□□□□ -1.88
RC3H1-202ENST00000367694 COX7A1P24310 79 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 PRB3Q04118 309 aaPredicted RBP3.31□□□□□ -1.88
RC3H1-202ENST00000367694 LYPD2Q6UXB3 125 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 IGHV1-8P0DP01 117 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 LINC00315P59091 139 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 SND1-IT1Q9HBX3 110 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 TRAV12-3A0A0B4J271 114 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 IGLV5-39A0A0G2JS06 123 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 Q8TAT8 98 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
RC3H1-202ENST00000367694 I3L2K1 104 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 ZFP36P26651 326 aaKnown RBP3.3□□□□□ -1.88
RC3H1-202ENST00000367694 Q8NDZ9 215 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 IGHV1-3A0A0C4DH29 117 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 CLPSL1A2RUU4 121 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
RC3H1-202ENST00000367694 KLK9Q9UKQ9 250 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 BSPH1Q075Z2 132 aa3.3□□□□□ -1.88
RC3H1-202ENST00000367694 CASC2Q6XLA1 102 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms