RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
SYNE1-208ENST00000367256 NTM-AS1Q6ZSK4 140 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 LMO4P61968 165 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 MSMPQ1L6U9 139 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 CIRBP-AS1Q8TBR5 109 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 PRR9Q5T870 116 aa5.35□□□□□ -1.55
SYNE1-208ENST00000367256 PLA2G5P39877 138 aa5.34□□□□□ -1.55
SYNE1-208ENST00000367256 Q6ZS46 218 aa5.34□□□□□ -1.55
SYNE1-208ENST00000367256 CRYGAP11844 174 aa5.34□□□□□ -1.55
SYNE1-208ENST00000367256 NANOS2P60321 138 aaKnown RBP5.34□□□□□ -1.55
SYNE1-208ENST00000367256 INAFM1C9JVW0 142 aa5.34□□□□□ -1.56
SYNE1-208ENST00000367256 TRBV7-7A0A0K0K1E9 115 aa5.34□□□□□ -1.56
SYNE1-208ENST00000367256 ZNF843Q8N446 348 aa5.34□□□□□ -1.56
SYNE1-208ENST00000367256 Q8N6K4 173 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 SPINK1P00995 79 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 C1orf229Q6ZS94 237 aaPredicted RBP5.33□□□□□ -1.56
SYNE1-208ENST00000367256 CHCHD7Q9BUK0 85 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 A0A087WYN8 130 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 CYSRT1A8MQ03 144 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 LY6G6CO95867 125 aa5.33□□□□□ -1.56
SYNE1-208ENST00000367256 TRBV10-3A0A0K0K1G6 114 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 PSMG3-AS1Q96PY0 264 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 C10orf99Q6UWK7 81 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 CHD8Q9HCK8 2581 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 BCE1O60756 84 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 Q6ZSV7 163 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 LINC01547P58512 204 aaPredicted RBP5.32□□□□□ -1.56
SYNE1-208ENST00000367256 H0Y9P7 68 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 BEAN1Q3B7T3 259 aa5.32□□□□□ -1.56
SYNE1-208ENST00000367256 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
SYNE1-208ENST00000367256 Q8NA96 180 aa5.31□□□□□ -1.56
SYNE1-208ENST00000367256 A0A1W2PNU3 283 aaPredicted RBP5.31□□□□□ -1.56
SYNE1-208ENST00000367256 A0A087WVE0 104 aa5.31□□□□□ -1.56
SYNE1-208ENST00000367256 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
SYNE1-208ENST00000367256 CDC42SE2Q9NRR3 84 aa5.31□□□□□ -1.56
SYNE1-208ENST00000367256 Q9BRP9 147 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 ZNF702PQ9H963 129 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 EGFEM1PQ0D2K5 195 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 SBSPONQ8IVN8 264 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 AMELXQ99217 191 aa5.3□□□□□ -1.56
SYNE1-208ENST00000367256 Q8N3U1 123 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 C19orf84I3L1E1 186 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 BRI3O95415 125 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 IGLV5-52A0A0A0MRZ9 124 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 ZNF580Q9UK33 172 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 LINC00242Q5T6M2 205 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 LINC01546A6NGU7 62 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 GAS8-AS1O95177 125 aa5.29□□□□□ -1.56
SYNE1-208ENST00000367256 IGLV1-40P01703 118 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 A0A1B0GW54 56 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 SMIM1B2RUZ4 78 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 LIMD2Q9BT23 127 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 PRM2P04554 102 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 URB1-AS1Q96HZ7 61 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 UNQ6190/PRO20217Q6UXQ8 127 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
SYNE1-208ENST00000367256 LY6G6DO95868 133 aa5.27□□□□□ -1.57
SYNE1-208ENST00000367256 PRR3P79522 188 aaKnown RBP5.27□□□□□ -1.57
SYNE1-208ENST00000367256 LINC00575Q6W349 94 aa5.27□□□□□ -1.57
SYNE1-208ENST00000367256 USP24Q9UPU5 2620 aa5.27□□□□□ -1.57
SYNE1-208ENST00000367256 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
SYNE1-208ENST00000367256 C11orf71Q6IPW1 123 aa5.27□□□□□ -1.57
SYNE1-208ENST00000367256 CRIP2P52943 208 aaPredicted RBP5.26□□□□□ -1.57
SYNE1-208ENST00000367256 COX6A2Q02221 97 aa5.26□□□□□ -1.57
SYNE1-208ENST00000367256 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
SYNE1-208ENST00000367256 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
SYNE1-208ENST00000367256 LINC01556Q5JQF7 62 aa5.26□□□□□ -1.57
SYNE1-208ENST00000367256 ADAMTSL4-AS1Q5T5F5 129 aa5.26□□□□□ -1.57
SYNE1-208ENST00000367256 CDIP1Q9H305 208 aa5.25□□□□□ -1.57
SYNE1-208ENST00000367256 C6orf223Q8N319 242 aa5.25□□□□□ -1.57
SYNE1-208ENST00000367256 WISP2O76076 250 aa5.25□□□□□ -1.57
SYNE1-208ENST00000367256 A0A1B0GUV1 79 aa5.25□□□□□ -1.57
SYNE1-208ENST00000367256 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
SYNE1-208ENST00000367256 PRLHP81277 87 aa5.24□□□□□ -1.57
SYNE1-208ENST00000367256 A0A087WSZ3 146 aa5.24□□□□□ -1.57
SYNE1-208ENST00000367256 A0A096LNJ9 63 aa5.24□□□□□ -1.57
SYNE1-208ENST00000367256 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
SYNE1-208ENST00000367256 DEFB116Q30KQ4 102 aa5.23□□□□□ -1.57
SYNE1-208ENST00000367256 FASNP49327 2511 aaKnown RBP5.23□□□□□ -1.57
SYNE1-208ENST00000367256 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
SYNE1-208ENST00000367256 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
SYNE1-208ENST00000367256 C2orf48Q96LS8 159 aa5.23□□□□□ -1.57
SYNE1-208ENST00000367256 PRRC2CQ9Y520 2896 aaKnown RBP5.22□□□□□ -1.57
SYNE1-208ENST00000367256 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
SYNE1-208ENST00000367256 PLA2G2AP14555 144 aa5.22□□□□□ -1.57
SYNE1-208ENST00000367256 A0A1B0GU69 56 aa5.21□□□□□ -1.58
SYNE1-208ENST00000367256 Q9UF83 564 aa5.21□□□□□ -1.58
SYNE1-208ENST00000367256 IGLV5-39A0A0G2JS06 123 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 H3BPC8 53 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 FSHBP01225 129 aa5.2□□□□□ -1.58
SYNE1-208ENST00000367256 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms