RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 ODF3L2Q3SX64 289 aa6.5□□□□□ -1.37
SYNE1-205ENST00000367251 MRPL55Q7Z7F7 128 aaKnown RBP6.5□□□□□ -1.37
SYNE1-205ENST00000367251 A6NED7 52 aa6.5□□□□□ -1.37
SYNE1-205ENST00000367251 AVPP01185 164 aa6.5□□□□□ -1.37
SYNE1-205ENST00000367251 LOC100131303A0A0U1RQF7 123 aa6.5□□□□□ -1.37
SYNE1-205ENST00000367251 COX7CP15954 63 aa6.5□□□□□ -1.37
SYNE1-205ENST00000367251 ESRGQ1W209 222 aa6.49□□□□□ -1.37
SYNE1-205ENST00000367251 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
SYNE1-205ENST00000367251 TANC2Q9HCD6 1990 aa6.49□□□□□ -1.37
SYNE1-205ENST00000367251 IGLV1-51P01701 117 aa6.49□□□□□ -1.37
SYNE1-205ENST00000367251 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
SYNE1-205ENST00000367251 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
SYNE1-205ENST00000367251 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SYNE1-205ENST00000367251 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
SYNE1-205ENST00000367251 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
SYNE1-205ENST00000367251 Q6ZQY7 126 aa6.47□□□□□ -1.37
SYNE1-205ENST00000367251 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
SYNE1-205ENST00000367251 FAM19A4Q96LR4 140 aa6.47□□□□□ -1.37
SYNE1-205ENST00000367251 ZNF73O43830 326 aaPredicted RBP6.47□□□□□ -1.37
SYNE1-205ENST00000367251 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
SYNE1-205ENST00000367251 C6orf223Q8N319 242 aa6.46□□□□□ -1.37
SYNE1-205ENST00000367251 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
SYNE1-205ENST00000367251 A0A1B0GUV1 79 aa6.46□□□□□ -1.38
SYNE1-205ENST00000367251 EGFEM1PQ0D2K5 195 aa6.46□□□□□ -1.38
SYNE1-205ENST00000367251 KLK9Q2XQG4 91 aa6.46□□□□□ -1.38
SYNE1-205ENST00000367251 LIMD2Q9BT23 127 aa6.46□□□□□ -1.38
SYNE1-205ENST00000367251 EDN2P20800 178 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 FHL2Q14192 279 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 V9GYY9 64 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 Q8N814 137 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 FAM30AQ9NZY2 134 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 Q8N2B8 174 aa6.45□□□□□ -1.38
SYNE1-205ENST00000367251 COX6A2Q02221 97 aa6.44□□□□□ -1.38
SYNE1-205ENST00000367251 A0A1W2PPR1 153 aa6.44□□□□□ -1.38
SYNE1-205ENST00000367251 CYSRT1A8MQ03 144 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 ADAMTSL4-AS1Q5T5F5 129 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 Q6ZTC4 211 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 NTM-AS1Q6ZSK4 140 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 USP9XQ93008 2570 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-205ENST00000367251 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 REG3GQ6UW15 175 aa6.43□□□□□ -1.38
SYNE1-205ENST00000367251 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
SYNE1-205ENST00000367251 PRM2P04554 102 aa6.42□□□□□ -1.38
SYNE1-205ENST00000367251 IGF2RP11717 2491 aa6.42□□□□□ -1.38
SYNE1-205ENST00000367251 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
SYNE1-205ENST00000367251 LINC00694P0DN24 101 aa6.42□□□□□ -1.38
SYNE1-205ENST00000367251 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
SYNE1-205ENST00000367251 IGLV5-39A0A0G2JS06 123 aa6.41□□□□□ -1.38
SYNE1-205ENST00000367251 PLXNB1O43157 2135 aa6.41□□□□□ -1.38
SYNE1-205ENST00000367251 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
SYNE1-205ENST00000367251 hDV103S1A0JD37 113 aa6.4□□□□□ -1.38
SYNE1-205ENST00000367251 LINC00315P59091 139 aa6.4□□□□□ -1.38
SYNE1-205ENST00000367251 IGLV4-60A0A075B6I1 120 aa6.4□□□□□ -1.39
SYNE1-205ENST00000367251 Q6ZSN1 163 aa6.4□□□□□ -1.39
SYNE1-205ENST00000367251 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
SYNE1-205ENST00000367251 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
SYNE1-205ENST00000367251 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
SYNE1-205ENST00000367251 C11orf72Q8NBR9 251 aa6.39□□□□□ -1.39
SYNE1-205ENST00000367251 KRTAP10-9P60411 292 aa6.39□□□□□ -1.39
SYNE1-205ENST00000367251 A0A087WYN8 130 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 UNQ6190/PRO20217Q6UXQ8 127 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 PKD1L2Q7Z442 2459 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 TRBV7-7A0A0K0K1E9 115 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 LINC00208Q96KT6 92 aa6.38□□□□□ -1.39
SYNE1-205ENST00000367251 FASNP49327 2511 aaKnown RBP6.37□□□□□ -1.39
SYNE1-205ENST00000367251 Q9BRP9 147 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 MDFIQ99750 246 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 CELA1Q9UNI1 258 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 MTORP42345 2549 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 ACANP16112 2415 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
SYNE1-205ENST00000367251 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
SYNE1-205ENST00000367251 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
SYNE1-205ENST00000367251 SBSPONQ8IVN8 264 aa6.35□□□□□ -1.39
SYNE1-205ENST00000367251 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SYNE1-205ENST00000367251 PRLHP81277 87 aa6.35□□□□□ -1.39
SYNE1-205ENST00000367251 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
SYNE1-205ENST00000367251 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
SYNE1-205ENST00000367251 TET2Q6N021 2002 aaPredicted RBP6.34□□□□□ -1.39
SYNE1-205ENST00000367251 PIEZO2Q9H5I5 2752 aa6.34□□□□□ -1.39
SYNE1-205ENST00000367251 UTRNP46939 3433 aa6.34□□□□□ -1.4
SYNE1-205ENST00000367251 BCE1O60756 84 aa6.33□□□□□ -1.4
SYNE1-205ENST00000367251 SERTAD4-AS1Q5TG53 156 aa6.33□□□□□ -1.4
SYNE1-205ENST00000367251 ACYP2P14621 99 aa6.33□□□□□ -1.4
SYNE1-205ENST00000367251 A0A087WSZ3 146 aa6.33□□□□□ -1.4
SYNE1-205ENST00000367251 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
SYNE1-205ENST00000367251 CXCL6P80162 114 aa6.32□□□□□ -1.4
SYNE1-205ENST00000367251 FHL3Q13643 280 aa6.32□□□□□ -1.4
SYNE1-205ENST00000367251 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
SYNE1-205ENST00000367251 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
SYNE1-205ENST00000367251 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
SYNE1-205ENST00000367251 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
SYNE1-205ENST00000367251 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
SYNE1-205ENST00000367251 A0A1B0GW54 56 aa6.31□□□□□ -1.4
SYNE1-205ENST00000367251 PCSK5Q92824 1860 aa6.3□□□□□ -1.4
SYNE1-205ENST00000367251 POLQO75417 2590 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms