RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 J3QQQ9 107 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 ZNF561-AS1K7EIQ3 104 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 CXCL5P42830 114 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 C15orf56Q8N910 161 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 COX7B2Q8TF08 81 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 C12orf57Q99622 126 aa4.48□□□□□ -1.69
RNU1-55P-201ENST00000365510 GVQW2A0A096LPI5 108 aaPredicted RBP4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 C16orf90A8MZG2 172 aa4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 CKS1BP61024 79 aa4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 HIGD2BQ4VC39 106 aa4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 Q6ZRN7 208 aaPredicted RBP4.47□□□□□ -1.69
RNU1-55P-201ENST00000365510 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 ZNF815PA8K554 130 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 LECT2O14960 151 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 NDUFA1O15239 70 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 COX8AP10176 69 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 NDUFA12Q9UI09 145 aa4.46□□□□□ -1.7
RNU1-55P-201ENST00000365510 F8WDY8 70 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 TSTD3H0UI37 97 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 EREGO14944 169 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 HERV-K104P63124 156 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 SCGB1D4Q6XE38 83 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 CAMK2N2Q96S95 79 aa4.45□□□□□ -1.7
RNU1-55P-201ENST00000365510 A0A087WTM6 91 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 TRBV30A0A0K0K1B3 111 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 LINC00587B1AMM8 73 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 DLEU1O43261 78 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 WFDC2Q14508 124 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 MEIG1Q5JSS6 88 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 SLC25A34Q6PIV7 304 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 NTN5Q8WTR8 489 aaPredicted RBP4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 LINC00526Q96FQ7 95 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 CARD19Q96LW7 228 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 FAT1Q14517 4588 aa4.44□□□□□ -1.7
RNU1-55P-201ENST00000365510 FLG2Q5D862 2391 aaPredicted RBP4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 CIRBPQ14011 172 aaKnown RBP4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 Q8N1X5 172 aa4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 Q8N814 137 aa4.43□□□□□ -1.7
RNU1-55P-201ENST00000365510 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 A0A0J9YXY3 114 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 HAMPP81172 84 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 Q6ZRU5 148 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 PRO1933Q9H354 126 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 PKIGQ9Y2B9 76 aa4.42□□□□□ -1.7
RNU1-55P-201ENST00000365510 TIMM17BO60830 172 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 COX17Q14061 63 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 C10orf25Q5T742 122 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 C6orf48Q9UBA6 75 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 TP73-AS1Q9UF72 201 aa4.41□□□□□ -1.7
RNU1-55P-201ENST00000365510 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 SMR3BP02814 79 aaPredicted RBP4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 SMIM13P0DJ93 91 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 GCSHP23434 173 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 PFN2P35080 140 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 LINC00158P58513 81 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 COPS9Q8WXC6 57 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 HIGD1BQ9P298 99 aa4.4□□□□□ -1.71
RNU1-55P-201ENST00000365510 MYCBP2O75592 4640 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 A0A0U1RRA0 63 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 SLPIP03973 132 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 INAFM2P0DMQ5 153 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 XGP55808 180 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 RPL18AQ02543 176 aaKnown RBP4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 C9orf116Q5BN46 136 aaPredicted RBP4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 Q6ZVH6 145 aa4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
RNU1-55P-201ENST00000365510 LOC107984640A0A0U1RRK4 108 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 TLX1NBP0CAT3 122 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 MIR7-3HGQ8N6C7 128 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 DAND5Q8N907 189 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms