RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SCO2A0A1W2PP80 73 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 E9PLD3 99 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 TAS2R45P59539 299 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 AP5S1Q9NUS5 200 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 IGHV1-24A0A0C4DH33 117 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 PYYP10082 97 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 IFITM1P13164 125 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 GAGE2BQ13066 116 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 LINC01545Q5VT33 79 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 IGKV3D-20A0A0C4DH25 116 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 LINC01559Q495D7 138 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 C20orf203Q8NBC4 194 aa3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 RPP21Q9H633 154 aaKnown RBP3.55□□□□□ -1.84
CDC42SE2-201ENST00000360515 LOC107984640A0A0U1RRK4 108 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 CRPP02741 224 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 IGLV7-43P04211 117 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 OR5AL1P0C617 328 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 FXYD2P54710 66 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 NEXN-AS1Q8NBZ9 246 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 RPL36ALQ969Q0 106 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 OSTCQ9NRP0 149 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 Q9UF83 564 aa3.54□□□□□ -1.84
CDC42SE2-201ENST00000360515 A0A096LNI7 61 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 SMIM27A0A1W2PRY6 76 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 K7ERJ3 54 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 RASL11AQ6T310 242 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 RNASE7Q9H1E1 156 aaKnown RBP3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 CHTF8P0CG12 524 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 MIR17HGQ75NE6 70 aa3.53□□□□□ -1.84
CDC42SE2-201ENST00000360515 TMEM262E9PQX1 116 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 PQLC2Q6ZP29 291 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 OR13C6PQ8NH95 151 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 PPDPFLQ8WWR9 84 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 NHP2Q9NX24 153 aaKnown RBP3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 C9JAW5 83 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 H3BTX0 84 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 Q6Q795 121 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 SGK494Q96LW2 274 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 CARD19Q96LW7 228 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 J3KT08 172 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 SNCGO76070 127 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 REG3AQ06141 175 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 C11orf52Q96A22 123 aa3.52□□□□□ -1.85
CDC42SE2-201ENST00000360515 PRNTQ86SH4 94 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 C2orf48Q96LS8 159 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 NCR2O95944 276 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 ARL14EPLP0DKL9 152 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 CACNG7P62955 275 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 CENPWQ5EE01 88 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 PCP2Q8IVA1 136 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 TCRAP04437 139 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 FOXA3P55318 350 aaPredicted RBP3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 HIGD1BQ9P298 99 aa3.51□□□□□ -1.85
CDC42SE2-201ENST00000360515 A8MWL6 223 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 CAMPP49913 170 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 TEN1Q86WV5 123 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 A0A1B0GX51 115 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 NMUP48645 174 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 NUP35Q8NFH5 326 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 CEND1Q8N111 149 aa3.5□□□□□ -1.85
CDC42SE2-201ENST00000360515 K7EMI3 77 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 SEC61GP60059 68 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 TRBV25-1A0A075B6N4 114 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 ANGP03950 147 aaKnown RBP3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 IGLC6P0CF74 106 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 MT1HP80294 61 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 COX6A2Q02221 97 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 LINC00269Q8N2A0 174 aa3.49□□□□□ -1.85
CDC42SE2-201ENST00000360515 GCHFRP30047 84 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 GNG5P63218 68 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 ATP5L2Q7Z4Y8 100 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 A0A1B0GXF2 115 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 LTAP01374 205 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 CRIP1P50238 77 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 HERVK_113P63121 156 aa3.48□□□□□ -1.85
CDC42SE2-201ENST00000360515 HIGD1CA8MV81 97 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 CHCHD5Q9BSY4 110 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 MLST8Q9BVC4 326 aa3.47□□□□□ -1.85
CDC42SE2-201ENST00000360515 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms