RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 Q8N3U1 123 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 LY6LH3BQJ8 138 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
VPS13B-203ENST00000358544 CRYGDP07320 174 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 FAM19A4Q96LR4 140 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 LINC01547P58512 204 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-203ENST00000358544 CRYBG3Q68DQ2 2970 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 DEFB112Q30KQ8 113 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 MRGPRG-AS1Q2M3A8 158 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 C3orf84H3BNL1 204 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 PIP4P1Q86T03 277 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 CHCHD7Q9BUK0 85 aa4.44□□□□□ -1.7
VPS13B-203ENST00000358544 C1orf158Q8N1D5 194 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 A0A087WZ39 114 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 COL4A4P53420 1690 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-203ENST00000358544 C4orf3Q8WVX3 66 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 GRNP28799 593 aaKnown RBP4.43□□□□□ -1.7
VPS13B-203ENST00000358544 DEFB121Q5J5C9 76 aa4.43□□□□□ -1.7
VPS13B-203ENST00000358544 F8WDY8 70 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 K7EQG2 157 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 CXCL6P80162 114 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 ZNF843Q8N446 348 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 A0A1B0GW54 56 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 ZNF580Q9UK33 172 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 REG3AQ06141 175 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 Q8N9L7 120 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 A6NDX4 124 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 Q6ZVQ6 151 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 WFDC10AQ9H1F0 79 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 C14orf177Q52M58 125 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 MAP6D1Q9H9H5 199 aa4.42□□□□□ -1.7
VPS13B-203ENST00000358544 IGLV5-39A0A0G2JS06 123 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 M0R378 163 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 KLK12Q9UKR0 248 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 Q8IZM0 81 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 NBEAQ8NFP9 2946 aa4.41□□□□□ -1.7
VPS13B-203ENST00000358544 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 EP400Q96L91 3159 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 RNF223E7ERA6 249 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.7
VPS13B-203ENST00000358544 CFAP54Q96N23 3096 aa4.4□□□□□ -1.71
VPS13B-203ENST00000358544 WIPF1O43516 503 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 LINC00959A0A1B0GUT2 108 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 PRO0255Q9UI72 69 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 TRBV6-8A0A0A6YYG3 113 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 DEFB4AO15263 64 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 ASH1LQ9NR48 2969 aaKnown RBP4.39□□□□□ -1.71
VPS13B-203ENST00000358544 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 BEAN1Q3B7T3 259 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 B9D2Q9BPU9 175 aa4.39□□□□□ -1.71
VPS13B-203ENST00000358544 COX6A2Q02221 97 aa4.38□□□□□ -1.71
VPS13B-203ENST00000358544 ESM1Q9NQ30 184 aa4.38□□□□□ -1.71
VPS13B-203ENST00000358544 CDC42SE2Q9NRR3 84 aa4.38□□□□□ -1.71
VPS13B-203ENST00000358544 IGHV4-61A0A0C4DH41 118 aa4.38□□□□□ -1.71
VPS13B-203ENST00000358544 FHL2Q14192 279 aa4.38□□□□□ -1.71
VPS13B-203ENST00000358544 IGF2-ASQ6U949 168 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 SPART-AS1P0CW21 52 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 ERC2-IT1O76042 136 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 WISP2O76076 250 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 LINC00336Q6ZUF6 198 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
VPS13B-203ENST00000358544 A0A1W2PNU3 283 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-203ENST00000358544 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
VPS13B-203ENST00000358544 HIGD2AQ9BW72 106 aa4.36□□□□□ -1.71
VPS13B-203ENST00000358544 DEFB135Q30KP9 77 aa4.36□□□□□ -1.71
VPS13B-203ENST00000358544 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-203ENST00000358544 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
VPS13B-203ENST00000358544 DEFB114Q30KQ6 69 aa4.36□□□□□ -1.71
VPS13B-203ENST00000358544 HCG22E2RYF7 251 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 TRAV10A0A0B4J240 114 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 F8W735 103 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-203ENST00000358544 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 C1orf137Q5JT78 98 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 ZANQ9Y493 2812 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 hDV103S1A0JD37 113 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 MUC22E2RYF6 1773 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-203ENST00000358544 Q8N2B8 174 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 SRRM2Q9UQ35 2752 aaKnown RBP4.35□□□□□ -1.71
VPS13B-203ENST00000358544 SYCNQ0VAF6 134 aa4.35□□□□□ -1.71
VPS13B-203ENST00000358544 CYSRT1A8MQ03 144 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 EDN2P20800 178 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 LMO4P61968 165 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 LITAFQ99732 161 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 DCHS2Q6V1P9 2916 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 TM2D3Q9BRN9 247 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms